| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1309 |
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| Symbol | |
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| ID | 8807075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1387740 |
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| End bp | 1389647 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
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| Protein accession | YP_003460553 |
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| Protein GI | 289208487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.939066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA GAAAACAACT CTGGATTGCG GTGGCCATCA TCATGCTGCT GGCCTTGCTG
GTAAGCATTG TGGTCAGCAC CCTGTCGGCG CGCGACTATC TGGCGCAGCA ACTGCTGACC
AAGAACATCG ACAACGCCGC TTCGCTGGCC CTGTCCCTCT CGCAGCTGCC CAAGGACGAC
ACGACTGTGG AGCTGCAGAT CGCCTCGCAG TTTGACACCG GGCATTACCG TCATATCCGC
CTGGTGGATC CTGGCGGCGA GCTGATGATC GAACGGCGCA ACCCCGAACC ACCGCAAGGC
GTCCCCGACT GGTTCGTCGA GCTTCTGGCG TTCAATGTGC GCCCCGGCAT CGCCCATGTC
TCGGACGGCT GGTCGTCGTT CGGCACACTG ATCGTCGAGA GCCAGACCAA CTACGCCTAC
GAGTCCCTGT GGGAAGGCAC CCTGCGCCTC ACCGCCATTT TTGCCGGAGG CCTTCTGCTC
ATCGGCCTGC TTGGATCCTT CCTGCTCGGA CGTCTTATCC GTCCGCTCCG TCAGGTCGTG
GATCAGGCCG AGGCAGTGGG CGAACGGCGG TTCGTGACGA CACCGGAACC GCGCACCTGG
GAGTTTCGCG CGCTGGTACG AGCCATGAAC CGGCTGACCG AACATGTCCG GATGATGCTG
CAGGAAGAAT CCTCTCGGCT GGAACGCCTC AAGAACCGCC TGCAACATGA TGATGTTACG
GGCCTTTTGA ATCGAGAATC TTTTCTTGCA CGGTTTCAGG CCACCCTCGA GAACCGCCAT
TCCGGCTCCG CCGGGAGCTT TGTCGTGCTG CGTGTTTCGA GCCTTCCCGA ACTCAATCAG
GCCATCGGAC ACGACAAACT CGATGCGCTT CTGGCGCGGA TTGCAGGTGT CGCCGAGCAG
CAGGTCAGCG TAACGGACTA CGGTGCGGCC GGACGCCTGA AAGGGTCGGA TGTCGCGGTC
TTCGGCGACG GCATTGGCGA CAGTCGTCGC TTTGCCGAAT CCTTGCTGAC CGCGATTCGT
GCCGAACTGG GACCCGCGGC CCCGGACATG ATGGCCCTGC ATCTGGCGGG CACGCCCTAC
CACCCCGACG ACAGCACCGG CGAGGTCCTC AGTCGCGTCG ATCAGGCGCT GGCTCGTGCG
GAGCTGGAAC CGGGCGATTC CATTGCCGAG GAGCCACACG CGGTCCTGCC GCACGCCAAC
CAGAACGAGT GGCGGACCGC GATTACCGTG GCCCTGGCTA CCCATGGCGT GCAGCTTGCG
CGTTTCCCCG TGATCGACGC CGACCACGAA CTGATGCACC ACGAGGCCCC GATGCGCCTG
CTGCTCGATG GGGAATCCCG GCCGGCGGGA TACTTCATGC CCTGGGCCGT GCGTCTGGAC
CTGATACGGC AACTGGACGA TGCCGTGCTG GAAACGGCAC TGGAACAACT TCGAAGCTCC
AGCGAACGGC TCGCGATCAA CCTGTCGGTC GACAGCCTGC AGGACACCGG CTTTCGCCAG
CGTCTGGAAT CCCGCCTGGC CTCCGACCCG GAAGTGGCCG GTCGCCTGTG GCTGGAATTC
CCGGCCCGAG GCGCCCTGGC CCATCCCGCC GAACTGCGCG ACCTGTGCCG TATCGCGCGT
GTCACGGGAT TTGTGGTCGG TCTGGAGCAC GCGGGGCCGG AGGCCTTCCG CTCACACGAC
CTTACCGCGT ACGGGCTGCA TTACGTGAAG CTGCAGGCCT CGCTGATCCA GGGTGTCCAT
CGATCCACGG AGACCCAGGC GCTGATTCGC GGGCTTTGCA CCCTGGCGCA CTCGATTGGC
ATTCTGGTGG TCGCCGAAGG CTGCGACAGC ACCGACGATA TCGAGCCCCT GATGGAGCTT
GGAATCGACG GCGTGACCGG CCGAGCCGTT CAGTCCCTCA AGGCTTGA
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| Protein sequence | MTLRKQLWIA VAIIMLLALL VSIVVSTLSA RDYLAQQLLT KNIDNAASLA LSLSQLPKDD
TTVELQIASQ FDTGHYRHIR LVDPGGELMI ERRNPEPPQG VPDWFVELLA FNVRPGIAHV
SDGWSSFGTL IVESQTNYAY ESLWEGTLRL TAIFAGGLLL IGLLGSFLLG RLIRPLRQVV
DQAEAVGERR FVTTPEPRTW EFRALVRAMN RLTEHVRMML QEESSRLERL KNRLQHDDVT
GLLNRESFLA RFQATLENRH SGSAGSFVVL RVSSLPELNQ AIGHDKLDAL LARIAGVAEQ
QVSVTDYGAA GRLKGSDVAV FGDGIGDSRR FAESLLTAIR AELGPAAPDM MALHLAGTPY
HPDDSTGEVL SRVDQALARA ELEPGDSIAE EPHAVLPHAN QNEWRTAITV ALATHGVQLA
RFPVIDADHE LMHHEAPMRL LLDGESRPAG YFMPWAVRLD LIRQLDDAVL ETALEQLRSS
SERLAINLSV DSLQDTGFRQ RLESRLASDP EVAGRLWLEF PARGALAHPA ELRDLCRIAR
VTGFVVGLEH AGPEAFRSHD LTAYGLHYVK LQASLIQGVH RSTETQALIR GLCTLAHSIG
ILVVAEGCDS TDDIEPLMEL GIDGVTGRAV QSLKA
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