| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1300 |
|---|
| Symbol | |
|---|
| ID | 8807064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1378242 |
|---|
| End bp | 1378772 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003460544 |
|---|
| Protein GI | 289208478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTGTC CGCACAGCGT TCTCCCGTTG CTGGGGGCTG TGCTCATACT GGCCGGGTGT
GCGGGCAGTC CCGAGCCGCG CGGGCCTGCA CCGGAACCTC TCAAGGTCGA CCCGGAACCC
CAGGTGGTCG AAGGCCCGAT GAGCTATGTA CCCGAAGCCG AGCTGAAGCG CTCCGAGGTC
GTACTGGCGG CGCTCGGACA CCTCGACACG CCATATCGCT ATGGCGGCAC CGACGCCAAT
GGGCTCGACT GCTCCGCCCT GGTCCAGCGC GCCTACCGCG AGGCCGGTCA AGATGTCCCG
CGGACCACGG GCGAACAGGC CGCCGCCGCG GTCCAGCGCG ATGGTGACCC AAGCCCCGGT
GACGTCGTGT TCTTCGCCAT CAACGGGAAT CAAATTGACC ACGTCGGGGT CTATGTCGGT
GAAGGCCGAT TTGTCCACGC GCCAAGCTCC CGCGGGCAGG TCCGCATCGA GGAACTCGAC
AATCCCTACT GGGCCCCGCG CACCCGATTC GCGGGCCATT TTTTCGACTA A
|
|---|
| Protein sequence | MPCPHSVLPL LGAVLILAGC AGSPEPRGPA PEPLKVDPEP QVVEGPMSYV PEAELKRSEV
VLAALGHLDT PYRYGGTDAN GLDCSALVQR AYREAGQDVP RTTGEQAAAA VQRDGDPSPG
DVVFFAINGN QIDHVGVYVG EGRFVHAPSS RGQVRIEELD NPYWAPRTRF AGHFFD
|
|---|
| |