| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1297 |
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| Symbol | |
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| ID | 8807061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1373043 |
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| End bp | 1375385 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_003460541 |
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| Protein GI | 289208475 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGAA AACGTATGAC CCGTTCCCGC CGAGGTGCCC GATCCGGAGG CCTGCGCCAT
TTCTTTGGTG CCGGGGTGTG GCTGTTCGCC GGTCTGGCGC TGGCCGGTAT CGGGGTTGGG
GCGATCTATG TCGTCTCGCT CGATCAGGAG ATTCGCGAGC GCTTCGAGGG CCAGCGCTGG
GCCTTGCCGG CGCGCGTCTA CGCGCGACCG CTGGAGCTGT ACGAGGGCCG GGCACTTACG
CCCCAGGCGC TGGAAACCGA ACTGGAGACA CTGAACTACC GCAGTAGTGC ACAGGGAAGC
GGCCCGGGCG AGTATCGCGT GGACGGCAAC CGGGTGTCGT TTACCACGCG CCCGTTCACC
TTTGGCGACG GTCCGGAGCC GGCCCATTCG GTGCGAGTGG ATTTTTCGGA TGGAAGGGTG
CAGTCCGTCC AGAAGCAAGG GAACGGTGAG CGCGTCGATC TGATGCGGGT CGAGCCCTTG
CTGATCGGGA GCATCTACCC GACCCATGGC CAGGATCGCA TCCTCGTGGC CATAGACGAG
GTGCCGCGGG AGCTGATCGG CGCGCTGCTT GCGATCGAGG ATCGTCGCTT CATGTCGCAC
CGCGGGGTAG ACCCGGCGGG TATTGCCCGG GCGGCCATGG CGAACCTGCG CGCGGGGCGG
ACGGTGCAGG GTGGCAGTAC GCTGACGCAG CAGCTGGTCA AAAACTTCTA CCTGACACGG
GACCAGACGC TGGCGCGCAA GGCGAACGAG GCGGTCATGG CCTTGTTGCT GGAGCGGCGC
TACTCCAAGC GGGAAATCCT CGAGGCCTAT ATCAACGAGG TCTACCTGGG TCAGTCGGGC
GAGCGCGCGA TCCACGGATT CGGCCAGGCC TCTCAGTTCT ACTACCAGCG GCCCCTGAAC
GAGCTGCGCC TGGACCAGCT GGCGCTGCTG GTGGGACTCG CCCGCGGTGC GAGCTACTAC
GATCCGCGTC GTCACCCCCA GCGTGCCAAG GCGCGCCGTG ATCAGGTGTT GCGCGCGATG
CTGGAGACCG GGTTGGCCGA TGCCGACCAG ATAGAGGCCG CACTGGATAC CGAACTCGAT
GTGTCTCCCG TGGTGCCGCA GGGCCGCAGC CGATTCCCGG CGTTCCTCGA CATGGTGCGT
CGCGAGTTGC GCGCCGACTA CGCGGACGAG GACCTGCGCA GCGAGGGTCT GCGCATATTC
ACCACCATGG ACCCGGTCGT GCAGCTCACG CTGGAGGAGC GCCTGAAGGC GGGGGTGGAT
CGGGTGATTG AGCAGCGCGG GTCCAACCTG GAGCGGCTAC AGGCGGCGGC CGTCGTGACC
GACCCGCAGG CGGGAGAGGT CCTTGCGGTG GTGGGGGATC GCAATCCGCA GTATCCCGGC
TATAACCGGG CGGTCGAGGC GCAGCGGCAG GTCGGGTCGG TGCTCAAGCC CTTCGTCTAC
CTGGCGGCGC TCACGCAACC TGGGCGCTAT ACGCTGGCGA GCCTGCTCGA TGACAGCCCA
ATGACCATCC AGCTGCCGCA TGGCGAGCCC TGGACGCCGC GCAATTTCGA CCGCGAACAC
CGCGGCGACG TAACGGCCTG GGAGGCGCTG GTCCAGTCGT ACAACGTCGC CACGGTCCAG
CTGGCACAAG AGATCGGTAT TTCGCAGCTG ATCGACGTAT TGCAGACGCT CGGTTTGCAG
CGCACCCCGG CCCCGTTGCC CTCGCTGGCC CTTGGGGCGA TCGAGTTGTC GCCACTGGAG
GTGGCCGGGC TTTACCAGGC GCTCGCCAAT GGCGGCTATG CGACCGGCAC CCGTGCCATT
CGCGATGTCC TCGACCTGGA GGACGAGGTT CTGTCCCACT ACGGGCTGGA ACTGCGCGGT
GCCGTACCCG ATGGCGCGGT CAGCCTGCTG ACTCACGCCC TGCATGATGT GACCACCGAG
GGGACCGGGC GGCAGATCAG CCAGCGCCTC CCGGGGCGTG TCGTGGCCGG CAAGACCGGC
ACCACGAACA ACTTCCGCGA TAGCTGGTTC GCCGGGTTCG ATGATCGCCA CGTCACGGTC
GTCTGGCTGG GGATGGACGA CAACGAGGCG ACCGGCCTGA CCGGAGGTGT GGCTGCGGCT
CCCATCTGGG CCGATGTGAT GGCCGGTCTT GGCGCACAGT CGCTGCAGCT AGGCCGTCAT
CCCGAGATTG CCTATCAGGA GATTGACCTG AAGTCCGGCC TCCGCGTCGA GCAGGACGAT
CATGCCTGCG AGGCGGTGAA AACGCTCCCG TTCTGGCAGA ATTCCATCCC CGAGAGCCGT
GCCGACTGCG ACACGGGCCG TACCCCGGAT GAGCGGGGCT TTTTTGAGAG ATTGTTCCGC
TAA
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| Protein sequence | MPRKRMTRSR RGARSGGLRH FFGAGVWLFA GLALAGIGVG AIYVVSLDQE IRERFEGQRW
ALPARVYARP LELYEGRALT PQALETELET LNYRSSAQGS GPGEYRVDGN RVSFTTRPFT
FGDGPEPAHS VRVDFSDGRV QSVQKQGNGE RVDLMRVEPL LIGSIYPTHG QDRILVAIDE
VPRELIGALL AIEDRRFMSH RGVDPAGIAR AAMANLRAGR TVQGGSTLTQ QLVKNFYLTR
DQTLARKANE AVMALLLERR YSKREILEAY INEVYLGQSG ERAIHGFGQA SQFYYQRPLN
ELRLDQLALL VGLARGASYY DPRRHPQRAK ARRDQVLRAM LETGLADADQ IEAALDTELD
VSPVVPQGRS RFPAFLDMVR RELRADYADE DLRSEGLRIF TTMDPVVQLT LEERLKAGVD
RVIEQRGSNL ERLQAAAVVT DPQAGEVLAV VGDRNPQYPG YNRAVEAQRQ VGSVLKPFVY
LAALTQPGRY TLASLLDDSP MTIQLPHGEP WTPRNFDREH RGDVTAWEAL VQSYNVATVQ
LAQEIGISQL IDVLQTLGLQ RTPAPLPSLA LGAIELSPLE VAGLYQALAN GGYATGTRAI
RDVLDLEDEV LSHYGLELRG AVPDGAVSLL THALHDVTTE GTGRQISQRL PGRVVAGKTG
TTNNFRDSWF AGFDDRHVTV VWLGMDDNEA TGLTGGVAAA PIWADVMAGL GAQSLQLGRH
PEIAYQEIDL KSGLRVEQDD HACEAVKTLP FWQNSIPESR ADCDTGRTPD ERGFFERLFR
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