| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1190 |
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| Symbol | |
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| ID | 8806952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1263024 |
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| End bp | 1265840 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003460435 |
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| Protein GI | 289208369 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.048961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.116022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TCCTGATCAA TGCCACGCAG CCCGAAGAGC TGCGCGTGGC CATGGTCGAC
GGCCAGCGGC TGTACGACCT CGATATCGAA CTGCCCTCGC GCGAGCGCAA GAAGGCCAAC
ATCTACAAGG CCAAGATCAC CCGCGTCGAG CCAAGCCTCG AAGCCGCGTT TGTTAATTTC
GGCGCCGAGC GCCACGGCTT TCTCCCGTTC AAGGAGATCG CCCCCTCCGC GGTTGGCGCG
CCGGCCGACA GCGACAAGCC CATCCGCGAG CTGCTAAAGG AAGGGACCCA GCTTCTCGTC
CAGGTGGAGA AGGAAGAACG AGGCAACAAG GGTGCCGCGC TGACCACCTA TATCAGCCTG
GCCGGGCGCT ACCTGGTCCT GATGCCGAAC AATCCCAAGG CCGGTGGCGT CTCGCGACGC
ATTGAGGGCG AAGATCGCGC GGAACTGCGC GAGGCCCTGT CCGGCCTGAC CATGCCCGAT
GGCATGGGCG TGATCGCCCG CACCGCCGGC GTGGGCCGCA GTACCGAAGA ATTGCAGTGG
GACCTCGACT ACATGACGGC CCTGTGGTCG GCGGTCACCG AGGCGGCGGA AAAGGCCAAT
GCCCCAGCGC TGATCCATCA GGAAAGCAAC GTGATCATCC GCGCCCTGCG CGATCACATG
CGCAATGACG TCGGCGAGGT GATCATCGAC GACGAGGCCG TCTATCAGCA GGCGGAGGAT
TTCGTCCGAC TGGTGATGCC CAACAGTCTG CGCAAGCTGA AGAAGTACGA CGACCCCGTC
CCGCTATTCA ATCGCTATCA GATCGAAAGT CAGATCGAGA GCGCCTTCGA CCGCGACGTG
CAGCTCCCCT CCGGCGGCGC ACTGGTCATC GACCATACCG AGGCCCTGAT CTCCATCGAC
GTGAACTCCG CCCGCTCCAC CAAGGGTGGC GACATCGAGG AGACCGCCTT CCACACCAAC
CTGGAGGCCG CCGAAGAGGT GGCGCGCCAG TTGCGCGTGC GGGATCTGGG CGGTTTGATC
GTGATCGACT TCATCGACAT GAACGCCAAC AAGCACCAGC GCGAGGTGGA AAACCGCCTG
CGCGAGGCGC TGGAGCTCGA CCGCGCGCGC GTTCAGGTCG GCCGCATCAG CCGTTTCGGG
CTGCTCGAGA TGTCGCGCCA GCGCCTGCGT TCCTCGCTCG GCGAGTCCAG CCAGATCACC
TGCCCCCGCT GTCAGGGGCA TGGCCAGGTC CGCAGCGTCG AATCGCTCGC CCTGTCGATC
CTGCGCCTGA TCGAAGAAGA GGCGATGAAA GACCGTACCG GCCTTGTCCT GGCGCAAGTC
CCCGTCGATG TCGGCACCTT CCTGCTGAAC GAAAAACGCG CATCGATCAA CGAGATCGAG
GCACGTCATC GGGTCGACAT CAGCATCGTC CCGAACCCGC AGTACCTGAC GCCGAAGTTC
GAGGTCCAGC GCGTGCGCGG CGACGAACGC GAAGAGGTCG TCAGTGGCCG CGGATCGCAT
GAACTGGTGG AGCCCGTCGA AGAGGATACC GACACGCACG GCGAACGCCG CGGCAAGGTA
GAGAAGCCCC TGGTCCAGGG TGTGAAGGTC AAGGCCCCGG CACCCATGGC CGAGTCCCCC
GCCCCGCAAG CACCCAGCGA GCCCGTGCAA CAACCCGGGT TCTTCACCCG CATCTGGTCC
TCGCTCTTCC CCAATGCCGC CCGCAATCAG GAACCGGAAG CCGACGAGAA GGATGAGGGG
CGCAAACGCG GCAAAGGCGG ACAACGCCCC AGCCGAGGTG GCGGAAACAG CCGTGGGGGT
GGCTCCAGCC GACGCCGTGG TGCGCGTGAC GACGGCGGGG AAAACCGCGA GGCAGCCAAG
GCATCAGGCA AAGGCGAGGC ACGCCCGGAT GGCAGCGCCG CTGGCGACGA GGGCGGCAAG
GGCCGCTCGC GGCGGCGTGG CGGTGGCACG GGTGGCGCCG CCACCAAGAC CCGTGACGCC
GAACCCAAGG CTGCAAAACC GAAGGCGGAA GCGGAAGAGC CCACCACAAA GTCCGAGGAA
GCCGCGGCAC CGTCCGGGAA CGGCCCGCCC ACGTCCGACG ACGATGGCAG CAAGGGCCGC
ACCCGTTCGC GCCGTTCGCG CCGTGGCGGG CGCCGTCGTG GTGGCCGTGG CCGTTCCACG
AACAGTGAAG ACAGCTCGGG CGGTGACAAT GCCGGAAACC AGGATGCTGC CGGGGCCCCG
AAGGAGGCCG ACCCGTCCGG CTCCTCGTCC CCGGATAGCG ACGTCCCCAG GAAGCCGGCG
GTGAAGGAGT CCGGCAAGGG CGATAGCCAG TCAGGCGACA GCGAGTCCAA GCCGGCCGCG
AAGCCGAAAT CGGCCGACAA GGACTCCGGC CAGGCCACCG ATGGCAGTAG CGCAAAGACG
CCGGAAGAGA AAGGGGCCGG CAGCGACAAG GCTCAGGCCC CGGCGGAGCA TTCCAGCGAG
GCCGGAAAGG CCGATAAAGC GGCAGAAGAC AGCCCCAAGG CTTCATCCGG CGCACGCCGG
ACGAAGGCGA GCGCTCAGTC CACGAAAACG GATGATGCCA AGGGCAAGAA CGACTCCGGA
TCGCACACCG AGAATCGCCC TTCCGAAGCC GCCAAAGCGG ATGACACCCC CGCGTCGAAG
CCTTCTCGTG GCAAGAAAAG TGATGCCAAG CCGGCGCCCT CGAAGGCCAC ATCCGCCGAG
GCCAGCGGTA CTGCCCGATC GGAGCCGGAC TCGGCACCAC CGGCCGACAA GCCGGCCCGC
AAGCCGGAAC CGGAGTCTGC GTCTTCGGGC AGCGCGGACG ACAAGCCGCG CGATTGA
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| Protein sequence | MKRILINATQ PEELRVAMVD GQRLYDLDIE LPSRERKKAN IYKAKITRVE PSLEAAFVNF
GAERHGFLPF KEIAPSAVGA PADSDKPIRE LLKEGTQLLV QVEKEERGNK GAALTTYISL
AGRYLVLMPN NPKAGGVSRR IEGEDRAELR EALSGLTMPD GMGVIARTAG VGRSTEELQW
DLDYMTALWS AVTEAAEKAN APALIHQESN VIIRALRDHM RNDVGEVIID DEAVYQQAED
FVRLVMPNSL RKLKKYDDPV PLFNRYQIES QIESAFDRDV QLPSGGALVI DHTEALISID
VNSARSTKGG DIEETAFHTN LEAAEEVARQ LRVRDLGGLI VIDFIDMNAN KHQREVENRL
REALELDRAR VQVGRISRFG LLEMSRQRLR SSLGESSQIT CPRCQGHGQV RSVESLALSI
LRLIEEEAMK DRTGLVLAQV PVDVGTFLLN EKRASINEIE ARHRVDISIV PNPQYLTPKF
EVQRVRGDER EEVVSGRGSH ELVEPVEEDT DTHGERRGKV EKPLVQGVKV KAPAPMAESP
APQAPSEPVQ QPGFFTRIWS SLFPNAARNQ EPEADEKDEG RKRGKGGQRP SRGGGNSRGG
GSSRRRGARD DGGENREAAK ASGKGEARPD GSAAGDEGGK GRSRRRGGGT GGAATKTRDA
EPKAAKPKAE AEEPTTKSEE AAAPSGNGPP TSDDDGSKGR TRSRRSRRGG RRRGGRGRST
NSEDSSGGDN AGNQDAAGAP KEADPSGSSS PDSDVPRKPA VKESGKGDSQ SGDSESKPAA
KPKSADKDSG QATDGSSAKT PEEKGAGSDK AQAPAEHSSE AGKADKAAED SPKASSGARR
TKASAQSTKT DDAKGKNDSG SHTENRPSEA AKADDTPASK PSRGKKSDAK PAPSKATSAE
ASGTARSEPD SAPPADKPAR KPEPESASSG SADDKPRD
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