| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1164 |
|---|
| Symbol | |
|---|
| ID | 8806926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1240854 |
|---|
| End bp | 1241342 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | flagellar basal body-associated protein FliL |
|---|
| Protein accession | YP_003460409 |
|---|
| Protein GI | 289208343 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.372404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0336547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGA AAGAAGTCGA ACTGGGTGAA GAAGGCGCCG GCGAAAAGGG CAAGAAGGGG
CTGACCTGGA TTGTCATTTT GCTGGTGCTC GTGTTCGCCG GGGCCGGTGC GGCGGCTGCG
TGGTTTTTCT TGTCCGGCGG TGACGAGGAA GAGACCGGCG AAGAAGGCCC TGCCGAGCGC
CACTACCACG GACTGGAGCC GATGACCGTG AACATTGATG GGCCCGGACG CATTCGCTAT
CTCCGGCTCG AGCTAAGCGT CGTGACAACC GACCCTGAGG TGATTGCAGC GCTGGAGCGG
CATATGCCGG CCGTTCGCAA TGATGTGCTG GGCCTGCTTG GAGAGAAACA CTACGACGAC
CTCAATACGC GTGACGGGAA GGAATCGCTC GCCGAGGAGC TGCGCGAGGC GATCGCCGAG
ATCCTTGAGG AGCGGGACGC ACCACATGAT GTGGAAGCGG TGCGCTTTAA CGAACTGGTC
ATGCAGTAG
|
|---|
| Protein sequence | MAEKEVELGE EGAGEKGKKG LTWIVILLVL VFAGAGAAAA WFFLSGGDEE ETGEEGPAER
HYHGLEPMTV NIDGPGRIRY LRLELSVVTT DPEVIAALER HMPAVRNDVL GLLGEKHYDD
LNTRDGKESL AEELREAIAE ILEERDAPHD VEAVRFNELV MQ
|
|---|
| |