Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1078 |
Symbol | |
ID | 8806838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1141854 |
End bp | 1142636 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003460326 |
Protein GI | 289208260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC GCCACCTGCA CGACTACTGG GTCGCCTTTC GCACCATTGT GACCAAGGAG GTGCTGCGCT TCGCGCGTAT CTGGGTGCAG ACCATCCTGC CACCGGTGAT CACCACCGCC CTGTACTTCA TTATCTTCGG GGGGCTGATC GGCGAGCGCA TCGGCGACAT GGACGGCTTT CGCTACATGG ACTTCATCGT CCCCGGGCTG ATCATGCTGG CGGTGATCAC CAACAGCTAC TCGAACGTCG TATCGTCCTT TTTCGGCTCA AAGTTCCAGC GCCATATTGA GGAGATGCTG GTCTCGCCAA TCCCGAACAG CGTAATCATC CTGGGTTTTG TGTTCGGGGG GGTGGCCCGC GGGCTCAGCG TCGGCGTGGC GGTCCTGCTT GTTTCCCTGT TCTTCAGCCC TCTGAGCATC CACAACATCG GCGTGATGCT GGTCGTCGTC CTGCTCACCT CAATCCTGTT CGCGCTGGCT GGACTGATCA ACGGCGTATT CGCCCGCACC TTCGACGACA TCGCGATCGT GCCCACTTTC GTGCTCACGC CCCTGACCTA TCTCGGCGGC GTGTTCTATT CGGTCAGCCT GCTCCCCGAG TTCTGGCAGG GCGTGTCGAT GCTCAACCCG ATCCTCTACA TGGTGGACGG ATTCCGCTAC GGCAGTCTTG GGTCCAGTGA CTTCCCGATC ATGGTCTCGT TTGCCGTAAT TGTGGCCTTC ATCGCGGTCT TGTACACGGC GGCCCTGATA CTGTTGAACA AGGGGATCGG GATCCGGTCC TGA
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Protein sequence | MSARHLHDYW VAFRTIVTKE VLRFARIWVQ TILPPVITTA LYFIIFGGLI GERIGDMDGF RYMDFIVPGL IMLAVITNSY SNVVSSFFGS KFQRHIEEML VSPIPNSVII LGFVFGGVAR GLSVGVAVLL VSLFFSPLSI HNIGVMLVVV LLTSILFALA GLINGVFART FDDIAIVPTF VLTPLTYLGG VFYSVSLLPE FWQGVSMLNP ILYMVDGFRY GSLGSSDFPI MVSFAVIVAF IAVLYTAALI LLNKGIGIRS
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