| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1075 |
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| Symbol | |
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| ID | 8806835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1135984 |
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| End bp | 1138260 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003460323 |
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| Protein GI | 289208257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.469487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACA GTACCCACAC GCGCACGGAA GCCCCTGACG ACGCGCCTCG GCACGAGGGC
CGGGATTCGC ACTCCACGGC GGGTCCCTTT GTTCTGGGCC TGGCGGCCGC TCTCGTGTTC
CTCGGGCTGT TTCTGCTGAT TGACCGCGCC TGGAAGATCG AGCTGGAAGA TCGCCAGAGT
GCCGCGGTGG CGGGCGAGCT CGCCAGTCTG CGCACTCAGG TGGAAAGCCT GATCAATGGG
CTGGTGCATT CGACCATCGG CCTGGCGGCC TACGCCTATG TGCATCCGGA CCTGGAAAGC
GACGAGTTCG AGCGCGTAGC CGAGCGCATC TACCGCGGGC ATGAAGACCT GGTGATCTCC
CTGACGCTGG CACGGGGGCC AATCATCGAA TTCGTCTATC CCCTCGAGGG GAACGAGGAC
GTGGTCGGGC TCAATCTCGC GACTCATCCC GAACAGGCGG ATTCCTTTCG CCGAGTCCTG
AACGAACGAG AGGTGGTCGT AGCGGGCCCC TGGCCGCTGG TTCAGGGTGG CTATGGGCTC
TTGGTGCGCG CCCCGGTGGA CACGGATCCC GCTCCAGATG GGCCTTCTCA CCTAGTCATT
GACGAGCATG CAAACCAGCT GAGCATCAGC AGCATAGCGC TCGATTTTGA GGCCTTGCTG
GAGCGTGCGG GCATCGGTGA ACAACGGGGG ACGCTGTTGC TGGCCCTGCG CGGCCGGGAT
GGTGTGGGCG AGGCCGGCCC GTTGTTCTAC AACCCGCATG GCCTCGACGA AGAGGCGTCG
TACCGGCATC GGATTCGTTT CCCGGGGGGC GAATGGCAGC TGCTGGCCGA TGTTGACCCG
ACGCACAGGG GTACGGATCG CCCGATGGCC TGGTGGGCAT TGGGGTTCGT GGGCGCACTT
GCGGTGGGCG GCTACACCTA TCGTGTCGGG ACGGGTCTGC AGGCACGTCG TCGCGACCTT
GATCGCTACC GGGGTCTGGT GAATCGGCTG GAAGACCCGA CGCTGGTGGT GTCGGGGCGA
CGCATCCTCT GGGCAAACCC GGCGTTTGTT CGGATGCTGG GGCAACAACC GCCTGTGAAT
ACGGTGCTGG CCCAGTTGGA TCTTGTGCAT CCGGATGATC TCGATCGGCT TCCACCCAAC
CTCGATTTCA CCGATACGCC GGCCGAGACG CATGGGCGCG AGGTTCGCAT ATGCGTGTCT
CAAGGGGGCT GTCGATTTTT CCTGTTGCGC TGGGTGCCTG TGGACTGGGA GCAAGGCCGT
GCATGGCTGT TGACGTTCGT CGACGTCAAT GAAAACCGGT TGTTGTTCGA CGCACTGACG
GCGGCGCGGG ATCTACAGGA CGCGATGTTC GAGGCCATTC CGGGGTATGC CTTTGTGGTC
GATTCGGAGG GAACGGTTCG ACACGTGTTC GGGGAGGCTT GCCATCGACA GGAGATGGCC
CCGGCCCTCC TTGGCGACAC CCTGGATCAG TTGTTTCCCT CGGACGTGGC GGCGAACTTC
CTGGAAATGG TGAACCGGGC GATCGACGAA GGGACACTGC AAACGAACGA ATACCGTCTG
GACGTGGATC TGCTGAAGCG CCTGGGGATC CCCGAGCATG AAACCGGTGC GCGCTGGTTC
GAGGCACGGA TCCGGCCTCT TGCGCGCGCA ATCAACGGCC TTCCCGCCGT TGTCTGGCAC
GCGCTTGATG TCACGGATCG GCGGGAACTC GAAGTCAAGT TGAAGACCAT GGCCTGGGAA
GACCCCCTGA CCGGGATGGC CAACCGGGCG GCAATGGATC GTGCGTTCCC GCGGTTAGCG
GCGCGCGCCG AGCGTCAGGG GGGGCGCCTC GCGCTGCTCT TCATCGATCT GGATCATTTC
AAGCCGGTGA ATGACCGCTA TGGTCATGCC GTGGGCGATC AGCTCTTGCG CCGGGTCGCG
GAAAGGCTGA AATCGCACCT GCGCCCGGAC GACGTCCTCG TCCGTCTGGG TGGGGACGAG
TTCATCGTCC TGACCGCGCC GCTGGATGAG CGTGAAGAGG GCCTTCATCT GGCCCAGCGG
GTTCAGCAGG ACCTCAATAA TACGTTCGAG GTCCACACCG GTCCTGGCGA ATTCGTGGAG
CTGAAAATCA CATCCAGTAT TGGTGTGGCC TTCTATCCGG ATGTAGGCCG GCATCTGTCG
GACCTGATGG TTGCGGCCGA TCGTGCGATG TATCAGGTCA AGGCGCAGGG GCACAATGAT
GTCGGCCTGG CGGGTGATGC ACCCCATAAC GATGGACGCT CCACGCCGCG GGCGTAA
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| Protein sequence | MDDSTHTRTE APDDAPRHEG RDSHSTAGPF VLGLAAALVF LGLFLLIDRA WKIELEDRQS
AAVAGELASL RTQVESLING LVHSTIGLAA YAYVHPDLES DEFERVAERI YRGHEDLVIS
LTLARGPIIE FVYPLEGNED VVGLNLATHP EQADSFRRVL NEREVVVAGP WPLVQGGYGL
LVRAPVDTDP APDGPSHLVI DEHANQLSIS SIALDFEALL ERAGIGEQRG TLLLALRGRD
GVGEAGPLFY NPHGLDEEAS YRHRIRFPGG EWQLLADVDP THRGTDRPMA WWALGFVGAL
AVGGYTYRVG TGLQARRRDL DRYRGLVNRL EDPTLVVSGR RILWANPAFV RMLGQQPPVN
TVLAQLDLVH PDDLDRLPPN LDFTDTPAET HGREVRICVS QGGCRFFLLR WVPVDWEQGR
AWLLTFVDVN ENRLLFDALT AARDLQDAMF EAIPGYAFVV DSEGTVRHVF GEACHRQEMA
PALLGDTLDQ LFPSDVAANF LEMVNRAIDE GTLQTNEYRL DVDLLKRLGI PEHETGARWF
EARIRPLARA INGLPAVVWH ALDVTDRREL EVKLKTMAWE DPLTGMANRA AMDRAFPRLA
ARAERQGGRL ALLFIDLDHF KPVNDRYGHA VGDQLLRRVA ERLKSHLRPD DVLVRLGGDE
FIVLTAPLDE REEGLHLAQR VQQDLNNTFE VHTGPGEFVE LKITSSIGVA FYPDVGRHLS
DLMVAADRAM YQVKAQGHND VGLAGDAPHN DGRSTPRA
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