Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1071 |
Symbol | |
ID | 8806830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1131354 |
End bp | 1132172 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | OmpA/MotB domain protein |
Protein accession | YP_003460319 |
Protein GI | 289208253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.230641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAGCC CCGGATACTC CACCTCCAAC CGCGCGGCCA TGCAGGCCGA GATGGACGCC CAGGCGGCGA CGCGACCGGA ACAGGCCTTT CTCGGCTCCT ATCCCGGCGA GCGCCAGCGC GATGACGAGC ACGCCTGGAT CCTCACCTAC CTCGACGTCC TCACCCTGGT CATCGTCATA TTCGTAATCA TGCTGACCTT CATGGACCCG CGCGACGACC GTCCCCTGGC CAGCGCGGCC CAGCCGATCC AGCTCGCCCA TCCCGATCGC CAGGCCCTCC TCGACCCGTT GGTCGCGCCG CTAACAGGAA ACCTCGGGGA TCTCGAAGGG CGGCTCCATG AACCGCTGCC GGAAGTGGAC GACCCCGATC TCGAGGGCAC GGCCACGACC GCATCCAGAA TGCGCGAGCA GGCACCTCAG GGCGTCGAGG TCGTGGAGCA CCCCGGCCGC ACCGAGCTGC GCATCCAGGA CGAGATCCTG TTCGCCAGCG GGCAGGCCGA TCTGCAACCG GAAGGCCGGA TGTTGCTGGC CCAACTGGAG CCCCTGCTGG ACGAGCACGA CGGCCTGATC ACCGTCGAGG GACACACCGA CAACATCCCG ATTGCGACGG AGCGCTTTCC GTCCAACTGG GAGCTCTCCT CGGCCCGCGC CAGCGGCGTG GTCCGCTATC TGCTGGACCA GGGGCTCGAG GCCGAGCGAC TGCGCGCCGT GGGCCGGGCC GACACCCAGC CTGTGGCCAG CAACGACACC GCACGCGGCC GTTCCGAGAA CCGGCGTGTC GCGCTGATCC TCGAGTCTCC AACGGCCGCG CATCCATGA
|
Protein sequence | MPSPGYSTSN RAAMQAEMDA QAATRPEQAF LGSYPGERQR DDEHAWILTY LDVLTLVIVI FVIMLTFMDP RDDRPLASAA QPIQLAHPDR QALLDPLVAP LTGNLGDLEG RLHEPLPEVD DPDLEGTATT ASRMREQAPQ GVEVVEHPGR TELRIQDEIL FASGQADLQP EGRMLLAQLE PLLDEHDGLI TVEGHTDNIP IATERFPSNW ELSSARASGV VRYLLDQGLE AERLRAVGRA DTQPVASNDT ARGRSENRRV ALILESPTAA HP
|
| |