| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1026 |
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| Symbol | |
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| ID | 8806783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1085175 |
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| End bp | 1087592 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003460277 |
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| Protein GI | 289208211 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.880185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.800822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGGA GATTCCTCAA AGGGCCGGCA CCCGGGCCTG GCGGTAGCGC GCCGGCGGAG
CCGCGCAGCC GTTCCGCATG GGTGATTGGG CTCGGGTTTA CCATCGTGCT CGTGCTGATG
GCGGCGTTGA TCGCGCTGGG CCTGAATCGT ATGGCTCAGG TGCACGACCG CCTTGAGCTG
ATTGTCCACG AACACAACGT GAAGACTGAG CTGCTGGGCA ACATGCGCAA CGCCGCCCGC
GAACGCTCGG TAACCCTGCT CCAGCTGTCG ATCACCACCG ACCCGTTCGA CCTCGATGAA
GGGATCATGA CCTTTCGTGG CCATGCCTCG AAGTTCATGT ACAACCGCCA GCAGCTGGAT
GCGATGCCGA TGACGGCGGC CGAACAGCGG CTGCTGGACG AGTCCCGCGG ACTGACCGAG
CGCGCGGTTC AGGTCCAGGA ACGCGTGCTC GACCACATCC TGGACGGCGA GACCGACGAG
GCGACGAGCT GGCTGCTCGC GGAGGCTATC CCGAAACAGG GGCGCGTGCT GGAACACCTG
GACGCGATGA TCAACCTTCA GCAGGAGGCC GGACTGACAG CCGTGCGCGA CACCGCGCGT
CAATACCGTA CCGCGGTCGT TCTGATGCTG GTGCTCGGCG GCGCCGCCCT ACTGATAGGT
GTGCTGATCA CGCTAGGTGT CCTGCGTCAT ACGCGGCGGA TCGAATCCGC ACTGCACGAA
GAAAAGGAAC GCGCCCAGGT CACATTGCAC GCCATTGGCG ATGGCGTGAT CACCACGGAC
CTCGAGGGCC GGGTCGACTA TCTCAACCCG GTCGCCGAGC ACCTGACGGG GTGGGACCAG
GCGTCCGCCT ACAACCAGCC CCTTGCAAGC GTGTTCCACA TCATCCGGGA GTCCACCGGC
GAGCGGCTCA ACCATCCGCT GACCGAACGC ATGCCGGATG GCACGGCCTG CACGCTGGAC
CAGGAGGCCA TCCTGATCTC GGCCGAGGGT CGCGAACACG CCATCGAAGA GGTCTCGGCC
CCCATCCGCG ACCGCGATGG CACCATCATC GGCGCGGCCC TGGTATTCCG TGATGTCTCC
AAGGCACGCG AGATGGCCCG CGAACTGTCC TGGGCCGCCA CCCACGACTG CCTGACCTCG
CTGGCCAACC GTGCGGAATT CGAGCGGCGC CTGAGCCAGC TGGTGGCCAC AGCCCAGCAG
GAAAACCGCG AACACGCCCT GCTCTACATG GACCTGGACC AGTTCAAGCT GGTCAACGAC
ACCTGCGGAC ACGGGGCAGG CGACGACCTG TTGTGCCAGC TGACCTCGCA GCTGCACAGC
CAGCTGCGCG AGAGCGACAC CCTGGCACGC CTGGGAGGCG ACGAGTTTGG CGTGCTGCTG
TCGAACTGCC CGCTGGTACA GGCGGAACGC ATCGCGGAGA CCCTGCGCAC AACCGTCGAC
AACTACCGGT TCGAGTGGCA GGGACGAATC TTCCGCGTCG GGATCAGCAT CGGGGTAGTC
CCGGTGTTCG GGCACCTGAA AGACACGGTG CAGTACATGA GCGAGGCCGA TGCCGCCTGC
TACCTGGCCA AGGAACAGGG ACGCAACCGC ATCCATGTCT CGCGGGCCGG GGACGCCGAG
CTGTCGCATT GCCAGGGCGA GATGAACTGC GTCCAGCGCA TTACCCATGC CCTGCAGCAC
AACCGATTCT GGTTACACGG GCAAAGGATC GTTCCGGTCT CCGGCGACGA ACCCACACAC
ACCGAGGTCC TGCTGCGGAT GGTCGAGGAG GACGGCACGG TCGTCCTGCC GGCCACCTTC
ATCCCCGCCG CAGAGCGCTA CGGGCAGATG CCCGCAATCG ATCGCTGGGT GATCAAGCGG
GTGCTTCAGC ACGTGGCCAC CGACACCGAT ACCGAGGGTC ACTTCGCCGT GAACCTGTCC
GGCCAGTCCC TCTGTGACCG GGGCATGCTG GACTATATCG TCCATCAGCT GCAGAACAGC
GGCGTCGAGC CCAGCCGAAT CTGTTTCGAG ATTACCGAGA CCGCCGCGAT CGCCAACCTG
AGCCAGGCCA GCCGCTTCAT CCGCGAATTG AGGGGCATGG GCTGTCACTT CTCGCTGGAC
GACTTCGGGA CGGGTATGGC CTCGTTCGGC TACCTCAAGA CACTGAAGGT CGACTACCTG
AAGATTGATG GCAGCTTCGT GCGCGATATG GCGGAGGACC GGGTCAGCCG GGCGATGGTC
GAGAGCATTC ACCACATCGG CCGCGTGATC GGGGTCAAGA CGGTCGCGGA GTGTGTCTCG
CACGAGCGCC TGATGGACGC CCTGCGGCTG GTGGGGGTGG ACTATGCCCA GGGCTTTGGA
CTCCACGTGC CGGAGCCCCT GGAACCCTGT CCTGTTCCGG TCGCGGAAAG CCGGCGTTCC
GGATCGGTCG CCGGCTGA
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| Protein sequence | MAGRFLKGPA PGPGGSAPAE PRSRSAWVIG LGFTIVLVLM AALIALGLNR MAQVHDRLEL
IVHEHNVKTE LLGNMRNAAR ERSVTLLQLS ITTDPFDLDE GIMTFRGHAS KFMYNRQQLD
AMPMTAAEQR LLDESRGLTE RAVQVQERVL DHILDGETDE ATSWLLAEAI PKQGRVLEHL
DAMINLQQEA GLTAVRDTAR QYRTAVVLML VLGGAALLIG VLITLGVLRH TRRIESALHE
EKERAQVTLH AIGDGVITTD LEGRVDYLNP VAEHLTGWDQ ASAYNQPLAS VFHIIRESTG
ERLNHPLTER MPDGTACTLD QEAILISAEG REHAIEEVSA PIRDRDGTII GAALVFRDVS
KAREMARELS WAATHDCLTS LANRAEFERR LSQLVATAQQ ENREHALLYM DLDQFKLVND
TCGHGAGDDL LCQLTSQLHS QLRESDTLAR LGGDEFGVLL SNCPLVQAER IAETLRTTVD
NYRFEWQGRI FRVGISIGVV PVFGHLKDTV QYMSEADAAC YLAKEQGRNR IHVSRAGDAE
LSHCQGEMNC VQRITHALQH NRFWLHGQRI VPVSGDEPTH TEVLLRMVEE DGTVVLPATF
IPAAERYGQM PAIDRWVIKR VLQHVATDTD TEGHFAVNLS GQSLCDRGML DYIVHQLQNS
GVEPSRICFE ITETAAIANL SQASRFIREL RGMGCHFSLD DFGTGMASFG YLKTLKVDYL
KIDGSFVRDM AEDRVSRAMV ESIHHIGRVI GVKTVAECVS HERLMDALRL VGVDYAQGFG
LHVPEPLEPC PVPVAESRRS GSVAG
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