| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0988 |
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| Symbol | |
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| ID | 8806745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1050127 |
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| End bp | 1051533 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003460239 |
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| Protein GI | 289208173 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGG ATTCGGAGCC GACGCGAGGG CCTGCGGCGG AGCCTGGCAA TGCCCGGCTG
CTGGTGATCG ATGACGAGCC GATCGCCTGC CGCCAGCTGG AGCAGGTGTT CCGTCGATCG
CCCTGCACGG TGGTGACGCA CGAGGATGGC GCGGCCGGTC TGCAGGCGCT GGAACAGGAA
CGTTTCGATG CGGTTCTGAC GGACCTGCGC ATGGCTGGCG TCGATGGCAT GCAGATCCTG
CACCGGGCCC GTGAGCTGGA TCCGGACCTG GCGGTCATCA TGATCACGGG GCATGCGACC
CTTGATTCCG CGGTCGAGGC GATGAAGGCC GGGGCGTTTC ACTACATCGC CAAGCCATTC
CGGATCGACG AGGTGCGGGA GGTCGTGGCC AAGGCGGTGG AGTTCACCCG GCTACGCCGC
GAGAACCATG CCCTGCGTGA TCAGGTGGAA CAGGGGGGGC GGCGCGCGAC GCTGGTGGCG
CAGGATGCTG CGATGCAGCG TCTGCTGGAG ACGGCCCGCC AGATTGCGCC CACGGACTGC
AATGTCGTGC TGACCGGCGA GAGCGGGACC GGGAAGGAGC TGCTGGCCCG CTACATCCAC
AATCACAGCA ATCGCGCGGC GGGGCCATTT CTGGCGGTCA ACTGCGGGGC GTTGCAGGAC
GAACTCCTGG CGAGCGAGTT GTTCGGCCAC GAGAAGGGTG CGTTCACCGG CGCCACCCAG
CAAAAGAAAG GCCTGTTCGA GAGCGCCGCG GGCGGGACAC TGTTTCTCGA CGAGGTTGCC
GAGACGAGTC CTGCGATGCA GGTGAGTCTG CTCCGCGTCC TGCAGGAACG GGAGGTGTTA
CGGGTCGGCG GACGCAAGCC GATTCCGGTG GATGTCCGTG TCATTGCCGC CAGTAACCGC
CGTCTGGATC GGGCGGTGGA CCGCGGCGAG ATGCGCGAGG ACCTGTATTT TCGCCTGAAC
GTGGTGAACC TCGTGCTGCC ACCGCTGCGC GAGCGCCGCG ACGATATCCC GCTGCTGGCC
TACTACTTTC TCAAGCGCCA TGCGCTGGCC ATGGGCAAGC GCATCGACGA CATCCAGCCG
GAGGCGCTGG AACGCCTGGT TGACCATGAC TACCCCGGCA ACGTGCGCGA ACTGTCCAAC
ATCATTGAAC GTGGTGTGGC TCTGGCCCGC ACGTCCCGTC TGGCGCTTGC GGACCTCCCG
CGCAGCCTGC GCGAGACGAC GGTGCGCGTG GTCGACGAGA CCCAGGCGCC GCTGAGGACG
CTCGAGGAGC AGGAGGCGAT ACAGATCCGT CAGGCCCTGG AGCAGACCGG GGGTAACCGC
ACGCAGGCGG CGCGCCTGCT GGGCATCGAC CGTGTCTCGC TGTGGCGCAA GATCAAGCGT
CTGGGCATCG ATGTGGGCTC TCATTGA
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| Protein sequence | MSMDSEPTRG PAAEPGNARL LVIDDEPIAC RQLEQVFRRS PCTVVTHEDG AAGLQALEQE
RFDAVLTDLR MAGVDGMQIL HRARELDPDL AVIMITGHAT LDSAVEAMKA GAFHYIAKPF
RIDEVREVVA KAVEFTRLRR ENHALRDQVE QGGRRATLVA QDAAMQRLLE TARQIAPTDC
NVVLTGESGT GKELLARYIH NHSNRAAGPF LAVNCGALQD ELLASELFGH EKGAFTGATQ
QKKGLFESAA GGTLFLDEVA ETSPAMQVSL LRVLQEREVL RVGGRKPIPV DVRVIAASNR
RLDRAVDRGE MREDLYFRLN VVNLVLPPLR ERRDDIPLLA YYFLKRHALA MGKRIDDIQP
EALERLVDHD YPGNVRELSN IIERGVALAR TSRLALADLP RSLRETTVRV VDETQAPLRT
LEEQEAIQIR QALEQTGGNR TQAARLLGID RVSLWRKIKR LGIDVGSH
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