| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0959 |
|---|
| Symbol | |
|---|
| ID | 8806715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1019633 |
|---|
| End bp | 1020322 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator PhoB, winged helix family |
|---|
| Protein accession | YP_003460210 |
|---|
| Protein GI | 289208144 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.159493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGA AGATTCTGCT GGTCGAGGAT GACACCGCAA TCCGCGAAAT GCTCCAGCTG
CCGCTGCACA AGGCCGGATA CGCGGTGCGA GAGGCTGGCG ATGTTCGCGC TGCCAAAGGC
CTGCTGCTGG AAGACCCACC CGATCTGATC CTGCTCGACT GGATGCTGCC GGATACCAGC
GGCCTCGACT GGGCGCGCAC GCTGAAGGCC AGCCCGATCA CCAAGGACAT CCCGATCATT
ATGCTGACTG CCCGCGGCGA AGAAGAAGAC CGCGTCCGCG GGCTGGACGT GGGTACCGAC
GACTACGTGA CCAAACCGTT CTCGCCGCGC GAACTGGTTG CCCGCATCAA GGCGGTACTG
CGGCGTACCG CCCCGATCAC CAGCGAAGAA CCAGTGGAGG TCGAGGGTCT GCGCCTGGAC
CCGGTCTCGC ACCGCGTGAG CGGCCACGGA GAGGCGCTAT CGATGGGCCC GACCGAATAC
AACCTCCTGC ACTTCTTCAT GACCCACCAG GACCGCGTAT TCACCCGCGG CCAGCTGCTC
GACCAGGTAT GGGGCACCAA TGTGTACGTC GAGGAACGCA CCGTGGATGT ACACATCCGG
CGCCTGCGCA AGGCACTGGC GCTGACCGGG CACGACCACC TCGTGCAAAC CGTACGCGGA
TCGGGGTACC GTTTCTCCCA GACTCCCTGA
|
|---|
| Protein sequence | MAVKILLVED DTAIREMLQL PLHKAGYAVR EAGDVRAAKG LLLEDPPDLI LLDWMLPDTS
GLDWARTLKA SPITKDIPII MLTARGEEED RVRGLDVGTD DYVTKPFSPR ELVARIKAVL
RRTAPITSEE PVEVEGLRLD PVSHRVSGHG EALSMGPTEY NLLHFFMTHQ DRVFTRGQLL
DQVWGTNVYV EERTVDVHIR RLRKALALTG HDHLVQTVRG SGYRFSQTP
|
|---|
| |