Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0729 |
Symbol | |
ID | 8806481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 782938 |
End bp | 785025 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | polyribonucleotide nucleotidyltransferase |
Protein accession | YP_003459980 |
Protein GI | 289207914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.504772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACACA AGAAGTCGTT CCAGTACGGA AACCATACCG TCACCTTCGA GACCGGTGAC ATCGCCCGCC AGGCCAGTGG CGCCGTCCTC GTCAACATGG CCGAGACCGT GGTCCTGGTG ACCGCCGTCG CGCGCAAGGA GGCCGAGCCC GGTCGCGACT TCTTCCCGCT GACCGTGAAC TATCAGGAAC GGACTTACGC CGCCGGCAAG ATCCCGGGTG GATTCTTCAA GCGCGAAGGG CGTCCGAACG AGAAGGAAAC GCTGACCTCG CGCCTGATCG ATCGTCCGAT CCGCCCTCTG TTCCCCGAGG GTTTCAAGAA CGAGACCCAG ATCGTGGCCA CGGTCATGTC GATCAACCCC GATGTCGATC CCGACATCCC CGCTCTGCTG GGCGCCTCGG CCGCACTGGC GCTGTCCGGT GTCCCGTTCG CGGGCCCGAT CGGCGCCGCG CGCGTCGGCT ATCGGGCCGG CGAGTACCTG CTGAACCCGA CCTACAGCGC CCTGGAAGAC TCCGATCTCG ACCTGGTCGT GGCGGGCACC GAGCATGCCG TGCTGATGGT CGAATCGGAG GCCAGTGAAC TCTCCGAGGA GGCGATGCTG GGGGCGGTGA TGTTCGGCCA CGAGCAGATG CAGGCCGCGA TCCAGGCGAT CAAGGAACTG GCGGCCGAGG CCGGCAAGCC GGCCTGGGAC TGGCAGGCGC CGCCGTCCGA GGCGTCGCTG GAAGACCGCG TTAAGGAGGC CGTGGGCAGC GACCTCGTTG AGGCCTACCA GATCGCCGAG AAACAGGCGC GTACCCAGCG CATCAGCGAA CTGCGCAGCC AGGCTGTCGA GGCGATCGCC AGCGAAGACG AGTCCGGGCC GAGCGCGGAA GACGTGAAGA CGGCGTTCCA CGATCTCGAG TACCGCCTGG TACGTGACCG CATTCTGGAT GGTAACCCGC GTATCGACGG GCGCGACAAC AAGACCGTAC GCCCGATCAG CGTCCAGACC AGCGTGCTTC CGCGCACGCA CGGCTCGGCG GTGTTTACCC GTGGCGAGAC CCAGGCGCTG GTCGTGGCCA CGTTGGGCAC GGATCGCGAT GCCCAGGTGA TTGACGCGAT CGAGGGTGAG CGGCGTGACC GTTTCATGTT GCATTACAAT TTCCCGCCCT ACTGCACGGG CGAGACCGGC TTCGTGGGCT CGCCCAAGCG CCGCGAGATC GGGCACGGGC GCCTGGCCAA GCGTGGCGTG GCGGCCGTGA TGCCGAAGGC CGAAGAGTTC CCCTACGTGG TGCGCGTGGT CTCCGAGATC ACCGAGTCCA ATGGGTCCAG CTCCATGGCG TCCGTCTGCG GGACCTCGCT CGCGCTGATG GATGCGGGCG TTCCGCTGAA GGCCCCGGTC GCGGGGATCG CGATGGGCCT GATCAAGGAA GGCGACCGCT TCGCCGTGCT GTCGGACATC CTGGGCGACG AGGATCACCT CGGTGACATG GACTTCAAGG TGGCCGGCAC GACCAACGGC GTGACCGCCC TTCAGATGGA CATCAAGATC GACGGGATCA CCCGCGAGAT CATGGAGCAG GCGCTGGCGC AGGCGCGCGA GGGCCGGATG CACATCCTTG GCTGCATGAA CGAAGTGCTG CCGAGCCACC GCGAGGAGAT GTCTTCGCAC GCGCCGCGCT TTATCACCAT GAAGATCAAC CCGGACAAGA TCCGCGACGT GATCGGCAAG GGCGGGGCGA CGATTCGTGC CCTGACCGAG GAGACCGGCG CGACGATCGA CATCCAGGAC GATGGCACGG TGAAGGTTGC CTCCACTGAC CAGGCCGCGG GCCTCGAAGC CAAGCGCCGT ATCGAGGAGC TGACTGCCGA CATCGAGGTC GGCCGTCAGT ACACCGGCAA GGTCGCGAAG ATCATGGACT TCGGGGCGTT CGTCTCGATC CTGCCGGGTC GTGATGGCCT GGTGCACATC TCGCAGATCT CCGACGAGCG GGTGGAGAAC GTGGCGGACT TCCTGTCCGA GGGCGACTCG GTCACCGTGA AGGTGCTGGA AGTAGACAAG CAGGGGCGCA TCCGCCTGAG CATGAAAGCG GTCGAGTCCG AGGCCTGA
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Protein sequence | MAHKKSFQYG NHTVTFETGD IARQASGAVL VNMAETVVLV TAVARKEAEP GRDFFPLTVN YQERTYAAGK IPGGFFKREG RPNEKETLTS RLIDRPIRPL FPEGFKNETQ IVATVMSINP DVDPDIPALL GASAALALSG VPFAGPIGAA RVGYRAGEYL LNPTYSALED SDLDLVVAGT EHAVLMVESE ASELSEEAML GAVMFGHEQM QAAIQAIKEL AAEAGKPAWD WQAPPSEASL EDRVKEAVGS DLVEAYQIAE KQARTQRISE LRSQAVEAIA SEDESGPSAE DVKTAFHDLE YRLVRDRILD GNPRIDGRDN KTVRPISVQT SVLPRTHGSA VFTRGETQAL VVATLGTDRD AQVIDAIEGE RRDRFMLHYN FPPYCTGETG FVGSPKRREI GHGRLAKRGV AAVMPKAEEF PYVVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPLKAPV AGIAMGLIKE GDRFAVLSDI LGDEDHLGDM DFKVAGTTNG VTALQMDIKI DGITREIMEQ ALAQAREGRM HILGCMNEVL PSHREEMSSH APRFITMKIN PDKIRDVIGK GGATIRALTE ETGATIDIQD DGTVKVASTD QAAGLEAKRR IEELTADIEV GRQYTGKVAK IMDFGAFVSI LPGRDGLVHI SQISDERVEN VADFLSEGDS VTVKVLEVDK QGRIRLSMKA VESEA
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