Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0710 |
Symbol | |
ID | 8806461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 761563 |
End bp | 762282 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_003459961 |
Protein GI | 289207895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.533269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC AAGACAACTG GATCGACGCC CTGCGGGCGG AACTGGGCGA CGCCCTGGAG ACGGTCACCG AGGCCTATGA CGAGGTCACC GTCGATATCC GGCCGCAAGC CTGGCGCGAG GCCGCCGAGA AACTGCGTGA TGCGTTCGGC TTCGAGATGC TGATCGACCT GTGTGGGGTG GACTATCTCG AATACGGCCA GGACGAGTGG GGCACAGAGT CCGCGACGAA CACGGGTTTC TCCCGCGGGG TCGAGCCGGC CACCTCCGGG CGATTCACCT TCGATGACGC CCCGGAAGAC AGCCTCTGGG ACGGGCCGCG CTTTACCGTG GCTGTGCAGC TGCTGTCGAT CCAGCACAAT CGCCGCCTGC GTATGCGCGC CTGGCTGGCG GATGACGAAT TCCCCGAGGT CGAGTCGCTG GTGGAGGTCT GGGCCTCGGC CAACTGGTTC GAGCGCGAGG CCTTCGACCT GTTCGGGATC CTGTTCTCCG GACATCCGGA CCTGCGCCGC ATCCTCACCG ACTACGGCTT TGTCGGCCAC CCGTTCCGCA AGGACTTCCC GCTGATCGGC CATGTCGAGA TGCGCTACGA CGCCGAGCAG GCGCGCGTGG TGTACCAGCC GGTGACCATC GAGCCGCGCG TGCTGGTGCC CAAGGTGATC CGCGACGACC ATCGCTACAG CGAGGGCGAG AAGCCGGGCG AAGGAGCCGA GAATGCCTGA
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Protein sequence | MAEQDNWIDA LRAELGDALE TVTEAYDEVT VDIRPQAWRE AAEKLRDAFG FEMLIDLCGV DYLEYGQDEW GTESATNTGF SRGVEPATSG RFTFDDAPED SLWDGPRFTV AVQLLSIQHN RRLRMRAWLA DDEFPEVESL VEVWASANWF EREAFDLFGI LFSGHPDLRR ILTDYGFVGH PFRKDFPLIG HVEMRYDAEQ ARVVYQPVTI EPRVLVPKVI RDDHRYSEGE KPGEGAENA
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