Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0574 |
Symbol | |
ID | 8806317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 604681 |
End bp | 605958 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
Protein accession | YP_003459825 |
Protein GI | 289207759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.237677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG AAAAGACCCC CTCCGCCGAC GGCAAGCTTC TGTACTGCTC TTTCTGCGGG AAGAGTCAGC ACGAAGTGCG CAAGTTGATC GCGGGGCCCT CCGTGTTTAT CTGTGACGAG TGTGTCGAGC TTTGCAATGA CATCATTCGC GAGGAGATGC AGGAGGCGGG GCATACCGAG CGCGATTCGC TGCCCAAGCC GCGCGAGATC CGCGAGATTC TCGACGACTA CGTGATCGGT CAGACCTCCG CGAAAAAGAT CCTCTCGGTC GCGGTGTACA ACCACTACAA GCGCCTCGAG GCCCGGGCCG GCAAGGATGA CGTCGAGTTG TCCAAGTCCA ACATCATGCT GATCGGCCCG ACCGGCTCCG GCAAGACGCT GCTGGCCGAG ACGCTGGCGC GGGTGCTCAA TGTCCCCTTC ACCATCGCCG ATGCGACCAC GCTGACCGAG GCCGGTTACG TGGGCGAGGA CGTCGAGAAC ATCATCCAGA AGCTGCTGCA GAAGTGCGAC TACGATGTGG AGAAGGCCGA AAACGGCATC GTCTACATCG ACGAGATCGA CAAGGTCTCG CGCAAGTCGG ACAACCCCTC GATCACCCGC GATGTCTCGG GCGAGGGCGT GCAACAGGCC CTGCTGAAGC TGATTGAGGG CACCACGGCC TCCGTGCCGC CGCAGGGCGG GCGCAAGCAT CCGCAGCAGG AGTTCCTGCA GGTCGACACC CGCAACATCC TGTTCATTTG CGGCGGCGCG TTCTCGGGTC TGGAAAAGAT CATCCAGCAG CGGGCGGAGA AGGGCGGCAT CGGTTTCTCC GCCGAACTCA GCTCCAAGGA CGAGAGCAAG AGTGGCGGCC AGTGGCTCAA GCAGCTGGAG GCCGATGACC TGGTGCGCTA CGGCCTGATC CCCGAGTTCG TCGGTCGCCT GCCGGTGCAG GCGACGCTGG ATGAACTGGA CGAGGATGCG CTGATCACCA TCCTGACCCA GCCGAAAAAC GCGCTGGTCA AACAGTACGC CCGCCTGTTC GAGATGGAAG GCGTGGAGCT GGAGTTCCGG GACGATGCCT TGGCCGCGAT CGCCCACAAG GCGATGGAGC GCAAGACCGG CGCCCGGGGC CTGCGTACCA TCATGGAGAA CATCCTGCTC GACACGATGT ACGAGCTGCC CTCGATGGAG GGCGTCAGCA AGGTGGTGAT CGACGAGGCC GTGATCCGCG GCGACGCCGA GCCTTACCTC ATTTACGAGA ACGCATCGTT CTCCAAGCAG GCCGCAGCGG ATTCCTGA
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Protein sequence | MSDEKTPSAD GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVELCNDIIR EEMQEAGHTE RDSLPKPREI REILDDYVIG QTSAKKILSV AVYNHYKRLE ARAGKDDVEL SKSNIMLIGP TGSGKTLLAE TLARVLNVPF TIADATTLTE AGYVGEDVEN IIQKLLQKCD YDVEKAENGI VYIDEIDKVS RKSDNPSITR DVSGEGVQQA LLKLIEGTTA SVPPQGGRKH PQQEFLQVDT RNILFICGGA FSGLEKIIQQ RAEKGGIGFS AELSSKDESK SGGQWLKQLE ADDLVRYGLI PEFVGRLPVQ ATLDELDEDA LITILTQPKN ALVKQYARLF EMEGVELEFR DDALAAIAHK AMERKTGARG LRTIMENILL DTMYELPSME GVSKVVIDEA VIRGDAEPYL IYENASFSKQ AAADS
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