Gene TK90_0556 details

Gene Information

• Locus tag: TK90_0556
• ID: 8806297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. K90mix
• Kingdom: Bacteria
• Replicon accession: NC_013889
• Strand: +
• Start bp: 590368
• End bp: 591099
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 71%
• Product: DnaA regulatory inactivator Hda
• Protein accession: YP_003459807
• Protein GI: 289207741

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.842862
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGATCCG AGGGCAACAG CCCGCTCGAG CGTCAGCTGC CGCTGGATCT GCGCCTGCGG 
GACGCCTCGC GTTTTTCCGG TTTTTATGCA CGGGGTAACG CCCTGGCGCG GGACGCCGTA 
CAGGCCCTGA GTGTCGGGAC CGGGATCCAG GAGCCACAGA TCCTGCTGCA CGGGCCTTCC 
GGCTCCGGCA AGACGCACCT GTTGCAGGCC GCCTGTTATC AGGGTCATGA GCGCGGGGAT 
CCGGTCAGCT ACCTGCCGCT GGGTGAAGTC GCCGAGGCGC CGCCGATGGC AGTGCTGGAT 
GGCCTGGAAC GTTCGTGTCT GGTGGCGCTG GATGACCTGG AGGCCGTGGT GGGGCGCGGA 
GACTGGGACG AGGCCCTGTT CGGGCTGGTG AATCGGCTGC GCGACGCCGG CTGTCGGGTG 
CTGCTGGCGG CGGCGGCGCC TCCCGAGGGC CTCCCGGTGC GGCTGCCGGA TCTGGCCTCG 
CGCCTGGCCT GGGGCCCGGT GTTCCGGATG CAGCGGCCGG ATGATGTGGC CTGCAAGGAG 
ATCCTGGCGC AGCGCGCGGC ACTGCGCGGG CTGGAGCTGC CGGAGCCGGT CGCGGATTAC 
CTGCTGCGCC GCTGCTCGCG TGACCTGTCC ACCTTGCTGG CGCTGCTGGA CCGTCTGGAT 
CTGGCCGCGC TGGCCCAGCA GCGGCGACTG ACCATCCCGT TCGTGCGCGA ACAGCTGGCC 
CGCATGGGCT GA 

 

Protein sequence

MRSEGNSPLE RQLPLDLRLR DASRFSGFYA RGNALARDAV QALSVGTGIQ EPQILLHGPS 
GSGKTHLLQA ACYQGHERGD PVSYLPLGEV AEAPPMAVLD GLERSCLVAL DDLEAVVGRG 
DWDEALFGLV NRLRDAGCRV LLAAAAPPEG LPVRLPDLAS RLAWGPVFRM QRPDDVACKE 
ILAQRAALRG LELPEPVADY LLRRCSRDLS TLLALLDRLD LAALAQQRRL TIPFVREQLA 
RMG