Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0545 |
Symbol | |
ID | 8806286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 576419 |
End bp | 580261 |
Gene Length | 3843 bp |
Protein Length | 1280 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | FAD linked oxidase domain protein |
Protein accession | YP_003459796 |
Protein GI | 289207730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.650585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG AACGCGTTCG AGAAATACCC TATAACTACA CTTCATTCTC CGACCGCGAA ATTGTCATCC GCTTCCTGGG TTCCGATACC TGGGACCTCC TCAACGAACT GCGTGGGGAA CGCCAGACGG GTGTGTCCGC GCGCATGCTG TTCGAGGTGC TTGGCGACAT GTGGGTGGTC GCCCGCAACC CGTATATCCA GGACGACCTG CTGGACGACA AGAAGCGCCG CAAATCGCTG ATCGATGCGA TGCAGCATCG CCTGGACCAG ATCCGCAAGC GTGCCGACGG CAACGAGAAG GCGCTGACGC TGGCGCGCCG TGCCCAGGCC GCGGTGACCG CATTTGCCGA CGAGTTCCAG CAGACGCTGG AGCTGCGCGA GCGTGTGCGC AAGCGTCTGA AGGGCCTGAC ACACAAGGAC AACATCCAGT TCGGGGGCCT GGCCCGTGTC TCCCACGTCA CCGACGCCAC CGACTGGCGC GTCGAGCTGC CGTTCGTCGT GCTGACGCCG GACTCCGAGG AAGAGATGGG GCCGCTGGTC GCCGCCTGTA TCGAACTGGG CCTGACCGTG ATCCCGCGTG GTGGTGGTAC CGGCTATACC GGCAGTGCCG TGCCGCTGTC CAAGCGTTCC GCGGTCATCA ATACCGAAAA GCTCGAAGGG ATCGGCCCGG TCGAGCGTCG CCCGCTCCCG GGTGTTGATC AGGACGTGGC CGTCGTGCGT GTCGAGGCCG GCGTGGTGAC CAAGCGCGTC TCCGAGCTGG CCGCCGAGAA CGGGCTGGTG TTCGCGGTGG ATCCCACCTC GCAGGATGCC TCCACCATCG GCGGCAACGT CGCGATGAAC GCCGGGGGCA AGAAGGCCGT GCTCTGGGGA ACCGCGCTGG ACAACCTGGC CTCCTGGACG ATGGTCACCC CAGAGGCCGA CTGGATGCGG GTCGAGCGCC TGGACCACAA CCTCGGCAAG ATCCATGACG CGGAGATAGT GCGGTTTCGC ATCACTCGCT ATGGCCCCGA CGGTCGTACC CCCAGGGGCG AACCCGAGAC GCTGGAAATG CCCGGTGCGC GCTTCCGCAA GGTCGGCCTG GGTAAAGATG TGACCGACAA GACCCTGATG GGCGTTCCGG GTATCCAGAA GGAGGGCTGT GACGGGCTGA TTACCTCGGC CGAGTTCATC CTGCACCGGA TGCCGGACAA CATCCGCACG GTTTGCCTGG AGTTCTACGG GACCGATCTG CACCAGGCCG TCCCGGCGAT CGTCGAGATC AAGGACGCGG TGGATGCCGA GGACGGCGTC CTGCTGGCGG GGCTGGAGCA CCTGGACGAG CGCTACGTGC GCGCGGTCAA GTACACCCCC AAGGGTGCCC GCGGCGAGCA GCCGAAAATG GTGCTGATCG CCGACATCGT CTCCGACAAC GAGGATGCCC TGGGCAAGCT CGCCGCCAAG ATGGTGCGTG CCGCCAATGC CCGCAACGGC GAGGGCTTCA TCGCCGTGAG CCCGGAGGCA CGCAAGCGTT TCTGGGCCGA TCGTGCGCGC ACCGCCGCGA TTGCCCACCA CACCAACGCG TTCAAGATCA ACGAGGACGT GGTGATCCCG CTGGAGCGAC TTGCCGAGTA CACCGAGGGG GTCGAGACCC TGAACGTGCG CGAGTCACTG AAGAACAAAC TGGCGATGGT CGACGAGGTG CTGGAGTGCA TGCGCGGCGA CCACCCCGAA CTGCGCGAAC TGCTGGAGGA TACCGGCGGC GAAGGGCAGC AGTGGTTCGA GGCCAAGCGC GAACGCGCGG TGGAGAAGCT CGAGGCGGTG CAGAAGCGCT GGAAGGCGAT CGCGGACAAC TTCTTCACGC TGGCCTCCGA GTGCGACGAG CTGCTGGACG AACCCGCCCG CGCCGATCGC CGTGACCACG ACAAGCTGAT CAACCTCTTG CTGCGGCGCA GCCTGCGCAT CTCCTATCGC GCGGAGGTGG AGCGTCCGCT GTTCGAGATT TTCGACGGTC ATCAGATGGA GTCGGTGCGC AAGCGCCTGG CCGCAATCCA CGACCGTGTG CTGACGAGTC GGCTGTTCAT CGCCCTGCAC ATGCACGCGG GTGACGGCAA TGTGCACACC AACATCCCGG TCAACTCCAA CGACTACCAG ATGATGCACC AGGCCGAACG CCTGGTGGAT GACGTGATGC GTCTGGCCCG TGAGCTGAAC GGAGTGATCT CCGGCGAACA CGGGATCGGG CTGACCAAGA TGCAGTATCT GGAGCCCGAG CGCATCGAGT CGTTCGCAAA GTACAAGCAG CAGGTCGACC CCAATGGCGT GTTCAACGCC GGCAAGCTGC TCGAGGGCTC CGGGCTGTCC AACGCCTACA CGCCGTCCCT GCGCCTGGTG AAGCAGGAGG CGCTGATCCT GGAGCAGAGC GAGCTGGGCG ATCTCAACGA CGAGATCAAG GACTGCCTGC GCTGCGGCAA GTGCAAGCCG GAGTGCAATA CGCACGTTCC GCGGGCCAAT CTGCTGTACT CGCCACGCAA CAAGATCCTG GCGACCGGGC TGATCGTCGA GGCGTTTCTA TACGAGGAGC AGACCCGCCG AGGTCTGTCG CTGCACCACT TCGACGAGAT GAATGATGTG GCCGACCACT GCACGATCTG CCACAAGTGC CTGAATCCGT GCCCGGTTGA CATCGACTTC GGCGACGTGA CCATGCACAT GCGCTCGATC CTGAAGAAGA AGGGCAAGCG CAAGGCCACG CCGGCAACGA TGATGTCCAT GGCGTTTTTG AACACCAAGG ACCCGTCCAG GATCAAGGGC ATCCGCAAGG GTGCGATCCA GTTGGGGTAT GCCGCCCAGC GGCTCGGCCA TTACACCTTC AAGAAGCTCA ACCTGCTGGG CGAGGGCAAG CGCCCGCGCT CGACCACGGG CAAGGCGCCG ATGCACGAGC AGGTCGTGCA CTTCGTGAAG AAGCCGATGC CCGCAGGTCT TCCGAGCCAG ACGACGCGGC AGATGCTGGG ACTGGAGGAT TCGCGCTACG TGCCGATCCT GCGCGATCCG GTCAAGACCG ATCTCGACTC GGACGCGGTG TTCTACTTCC CCGGCTGCGG CTCCGAACGC CTGTTCAGTC AGGTCGGCCT GGCCACGCTG GCCATGCTCT ACGACGTTGG CGCGCAGACG GTTCTGCCGC CCGGCTACCT GTGCTGTGGC TACCCGCAGA ACTCCAACGG CGACTTCGAC AAGGGCTCGC AGATCACCAC CGAGAATCGG GTGCTGTTCC ATCGCGTGGC GACCACGCTG AACTACCTGG ACATCAAGAC CGTGGTGGTC TCCTGCGGCA CCTGCATGGA TCAGCTGCTC AAGTACGAAT TCGAGCGCAT TTTTCCGGGC TGCCGGCTGC TCGATATCCA CGAATACCTG ATGGAGAAGG GCGTGAAGCT CGAGGGGCTC AAGGGCGTAC AGTACATGTA CCACGACCCT TGCCACTCGC CGATGAAGTC GCACAAGCCG ACCGACGTGG CAGGAAAGCT GCTGGGCCAG GAAGTGCTGC AGTCCAACCG CTGCTGTGGC GAGGCCGGCA CCTTTGCGGT CAGCCGTCCG GATATTGCCA CCCAGGTGCG CTTCCGCAAG CAGGAAGAGC TGCACAAGGG TATCCGTCAG CTCACCGGCG AGGACAAGGC CGAAAACGGC AACGTCAAGC TGTTGACCTC CTGCCCCGCC TGTCAGCAGG GCCTGTCGCG CTACCGCGAC GACACGGGGC TGGACACCGA CTACATCGTG GTCGAGATGG CCAACCGCCT GATGGGCGAG GGCTGGCAGA AGGGCTTCAT CGACCGGGCG CGCGAGGGCG GCATCGAGAA GGTCCTCCTT TAG
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Protein sequence | MTAERVREIP YNYTSFSDRE IVIRFLGSDT WDLLNELRGE RQTGVSARML FEVLGDMWVV ARNPYIQDDL LDDKKRRKSL IDAMQHRLDQ IRKRADGNEK ALTLARRAQA AVTAFADEFQ QTLELRERVR KRLKGLTHKD NIQFGGLARV SHVTDATDWR VELPFVVLTP DSEEEMGPLV AACIELGLTV IPRGGGTGYT GSAVPLSKRS AVINTEKLEG IGPVERRPLP GVDQDVAVVR VEAGVVTKRV SELAAENGLV FAVDPTSQDA STIGGNVAMN AGGKKAVLWG TALDNLASWT MVTPEADWMR VERLDHNLGK IHDAEIVRFR ITRYGPDGRT PRGEPETLEM PGARFRKVGL GKDVTDKTLM GVPGIQKEGC DGLITSAEFI LHRMPDNIRT VCLEFYGTDL HQAVPAIVEI KDAVDAEDGV LLAGLEHLDE RYVRAVKYTP KGARGEQPKM VLIADIVSDN EDALGKLAAK MVRAANARNG EGFIAVSPEA RKRFWADRAR TAAIAHHTNA FKINEDVVIP LERLAEYTEG VETLNVRESL KNKLAMVDEV LECMRGDHPE LRELLEDTGG EGQQWFEAKR ERAVEKLEAV QKRWKAIADN FFTLASECDE LLDEPARADR RDHDKLINLL LRRSLRISYR AEVERPLFEI FDGHQMESVR KRLAAIHDRV LTSRLFIALH MHAGDGNVHT NIPVNSNDYQ MMHQAERLVD DVMRLARELN GVISGEHGIG LTKMQYLEPE RIESFAKYKQ QVDPNGVFNA GKLLEGSGLS NAYTPSLRLV KQEALILEQS ELGDLNDEIK DCLRCGKCKP ECNTHVPRAN LLYSPRNKIL ATGLIVEAFL YEEQTRRGLS LHHFDEMNDV ADHCTICHKC LNPCPVDIDF GDVTMHMRSI LKKKGKRKAT PATMMSMAFL NTKDPSRIKG IRKGAIQLGY AAQRLGHYTF KKLNLLGEGK RPRSTTGKAP MHEQVVHFVK KPMPAGLPSQ TTRQMLGLED SRYVPILRDP VKTDLDSDAV FYFPGCGSER LFSQVGLATL AMLYDVGAQT VLPPGYLCCG YPQNSNGDFD KGSQITTENR VLFHRVATTL NYLDIKTVVV SCGTCMDQLL KYEFERIFPG CRLLDIHEYL MEKGVKLEGL KGVQYMYHDP CHSPMKSHKP TDVAGKLLGQ EVLQSNRCCG EAGTFAVSRP DIATQVRFRK QEELHKGIRQ LTGEDKAENG NVKLLTSCPA CQQGLSRYRD DTGLDTDYIV VEMANRLMGE GWQKGFIDRA REGGIEKVLL
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