| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0538 |
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| Symbol | |
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| ID | 8806278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 570078 |
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| End bp | 571499 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003459789 |
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| Protein GI | 289207723 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0102949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGA GTGACGGGCT GAACGATCGC GTACTGGTGG TCGAAGACGA TCGGGGCCAT
CGCGAACTCC TGGCCGAGGA GCTGGCCGAG GTGGGTTACG CGGTCACTGC GGTGGAGACG
GCCGAGGAGG CCGAGCAGGT ACTGCGCCAG CAAACGGTTT CCCTGGTGGT CAGCGACCTG
CGTCTGCCCG GTGCCGATGG CTTCCATGTG CTGGAGGTGG CGCGCGACAC GGTGCCGGTG
CCCGGGTTCA TCATGCTCAC GGGCTTCGGC ACGATCGATC AGGCCGTGAC GGCGTTGAAG
GCGGGTGCGG ACGACTTCTT GACCAAGCCC GTCGATCTGG AACACCTGCG TCTGGCGGCC
GAGCGAGTGG CCGAGGCCCG TCGGCTGCGT GCGGAGGTAC GCCAGTATCG TGAGGCCCTT
GCGGGCGACG AGAGCTTTCA TGGCATGCAG GGCAAGAGCC CGGCGATGCT CAAGTTGCAC
GATCTGATCC GGCGTATCGC CGCTGCCGAC GGCAGCGTAC TCATCACAGG AGAATCGGGC
ACGGGCAAGG AGCTGGTTGC CCGTGCCCTG CATGCGGAGA GTGCCCGCGC GGAAGGCCCA
TTCATCGCAC TGAACTGTGC GGGCATCCCG GAGACCTTGC TGGAGTCGGA GCTGCTGGGG
CATGTCGCCG GGGCGTTCAG CGGCGCGAAG GGCGCGCGCC GCGGCCTGTT TACCGAGGCC
GACGGCGGCA CGCTGTTCCT CGACGAGATC GCCGAGATGC CGGTGGCCAT GCAGAGCAAG
CTGCTGCGGT TGCTGCAGGA CGGGCGTGTC CGACCGGTCG GTTCCAACGA GGAGATCGAG
ACGGACGTGC GCATCGTGGC CGCCACCCAT CAGGACCTGC AGGAACGTAT CCGCCACGAG
CAGTTCCGCG AGGACCTCTA TTATCGTCTG GAGACCTTCC GTATCGAGAT CCCGCCCCTG
CGCGATCGCG GTGACGACAT CGAGCGCCTG GCGCAGCAGT TCCTGCGCGA GCAGGCGCTG
GCGCGCGGGC TGCCCGTGCG CGAACTCAGC CCGGAGGCCA TGCGTGCCCT GCTGCGCTAC
GGCTTCCCCG GGAACGTCCG CGAACTGGCC AGCCTGATGG AACGCGCGGC GACTCTTGCA
TCCGGTGAGG TGATCGAGCT ACGCGACCTG CCCGAGCGTG TGCGCCAGTC CGGGACCGCT
GGCGGCTCGG GTGTATCGCC CGGGAATGTC GCTGGAACCG ACCTGCCGAT ACCCGGCACC
GGTGATGACA GCCATTGGCC CAGCCTCGCA GAGGTCGAGC AGGCCTATCT GCATCGGGTC
CTGGAGCATG TCGAGGGCAA CAAGCAGCGC GCCGCGCGCA TTCTGGGGAT CGGGCGCAAG
ACGCTTTATC GCAAGCTGGG CGAGAGCGAG TCGGATTCCT GA
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| Protein sequence | MSPSDGLNDR VLVVEDDRGH RELLAEELAE VGYAVTAVET AEEAEQVLRQ QTVSLVVSDL
RLPGADGFHV LEVARDTVPV PGFIMLTGFG TIDQAVTALK AGADDFLTKP VDLEHLRLAA
ERVAEARRLR AEVRQYREAL AGDESFHGMQ GKSPAMLKLH DLIRRIAAAD GSVLITGESG
TGKELVARAL HAESARAEGP FIALNCAGIP ETLLESELLG HVAGAFSGAK GARRGLFTEA
DGGTLFLDEI AEMPVAMQSK LLRLLQDGRV RPVGSNEEIE TDVRIVAATH QDLQERIRHE
QFREDLYYRL ETFRIEIPPL RDRGDDIERL AQQFLREQAL ARGLPVRELS PEAMRALLRY
GFPGNVRELA SLMERAATLA SGEVIELRDL PERVRQSGTA GGSGVSPGNV AGTDLPIPGT
GDDSHWPSLA EVEQAYLHRV LEHVEGNKQR AARILGIGRK TLYRKLGESE SDS
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