| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0536 |
|---|
| Symbol | |
|---|
| ID | 8806276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 567495 |
|---|
| End bp | 568175 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003459787 |
|---|
| Protein GI | 289207721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0161694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGC ACCTGAGCCA CCCCGTTACC GCACTCGCGC AGAACGCCAC CCTGATCTGG
TGCGACCAGA CCCGCGTGGC CGCCTGGGTA GACCCCGGGG CCGAGCCCGA CACGCTGATC
GCGATCGCAC GACAGCAGGA TGTCCGGCTG GACTGCATCC TGCTGACCCA TGGCCACCTC
GATCATGTCG GGGCCGCCGC CGAGATGGCG CGCCGCTGCG ATATCCCGAT CCTGGGCCCT
CAGGTTGAGG ATGCCTTCTG GCTGGATCAG CTACCGATGC AGTGTCAGAT GTTCGGGTTT
CCCGAGCTGC CCGCACTGGT TCCGGATCGC TGGCTGCAAG ATGGCGAACA ACTGCCGCTG
GGCAAGGTCA CGCTCGAGGT GCTGCACTGC CCGGGACATA CCCCGGGGCA TGTCGCGTTC
TTCGACCGCG AGAGTCGCCT CGCCCTGGTG GGCGATGTCC TATTCCATGG CGCCATCGGC
CGCAGCGACT TCCCGCGCGG CAACGGGCCG CAACTAATCG AGTCCATCAC CCGGCGCCTC
TGGCCACTGG GCGACGATGT ACGCTTTGTG CCCGGACACG GCCCGGAATC AACCTTCGGG
GAAGAGCGCC GCAGCAATCC GTTTGTGGGT GATGCGGCCT TGGCCGCGGG TGGTCAGCCG
GGCCGCGGAC GTTATTATTG A
|
|---|
| Protein sequence | MLQHLSHPVT ALAQNATLIW CDQTRVAAWV DPGAEPDTLI AIARQQDVRL DCILLTHGHL
DHVGAAAEMA RRCDIPILGP QVEDAFWLDQ LPMQCQMFGF PELPALVPDR WLQDGEQLPL
GKVTLEVLHC PGHTPGHVAF FDRESRLALV GDVLFHGAIG RSDFPRGNGP QLIESITRRL
WPLGDDVRFV PGHGPESTFG EERRSNPFVG DAALAAGGQP GRGRYY
|
|---|
| |