Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0529 |
Symbol | |
ID | 8806269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 553654 |
End bp | 555381 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_003459780 |
Protein GI | 289207714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGTCG ATCGCCTGCG TGTCCCGGGA ATCACCAGCG TCTTTGCGCT GGTGCTGTTG CTGGTCGCGG CGATCGCGGT GTTCAGCTGG TGGCGGGTGC AGCACCTGCA ACAGGACATC CAGACCCTCA CCGAAGAACA CATCCAGAAA GTGGATCATG TCCATCGCAT GCGCAGCCTG GTGCGCGAGC GGGTGCTGCG TGCCTCGCTG GTGGTCAGTG CGGAGGATAC CGCGCTGCAG GAGCGCTACT ACCGCGAGTT TCGCGAGCTG GCACCCCGCT TTGTCGAGAC ACTGACGGCC GCCGAGTCCC AGGCCGAACG GCCTGCGGAC CGTCAACGTA TGCAGGAGTT GCGGGAGTTG ACCTCGGTCG GCGCCCCGCT GCTGGAAGAT ATTGTCGACA TTGCCCTGGT CGGGGACCGC AATGAGGCCC TGGGGATGCT GTACGCTGAT CTGATGCCGA TCCAGGAGGA GGTTCTGGGT CAGATGGAGC GCATCCTGGA GGCCTTCCAC CGCGATAATG CACGGGCCAT CGAGGCCATG GCGCAACGCC ATGAACAAAG CCAGCAGTGG ATGCTTGGGG CGACCGCGCT GGCGGCGGTA CTGATTATCC TGCTCGCGGC CTGGGTCCGT TATCGCCTGC GGCGCAACCA TCAGGCGCTG CAGGACGAGT TGCGCGAGCG CATGCGGGTG GAGGCCCGAC TGCGCGAAAC CCAGGGCGGG CTGGAGGCCG CGGTGGCCCG GCGCACGGCA GCACTGGAAG AGACCACGGC GCGCCTGGAA GAGGCGCAGC GCAGCGCCGG CGCGGGATTC TGGGACTGGG ATATCCGCAA TGGTCAGCTG AACTGGTCCG CCCATGTGTT CGAGCTGTTC GGGCTGGACC CCAGGGTGGA CGAGGCGGGC TTCGAGTCCT ACATCCATGC GGTGCATCCG GATGACCGGA CCCGTGTGCG CCGCACCATC AATCAGGCGC TGGCCAGCGA GGCGGTCTAT CGTGTCGATC ACCGGGTCGT GCGTCCGGAT GGCGGGGTGC GTCACGTGCG TGTGGAGGGC GAGATCGCCC GTGACGATGC CGGTCGGCCG TTGCAGGTCC TGGGCATGGT GCGGGACATC ACCCTGGAGA AGGCCTCGGA GGAGCGGCTC TGGCACCAGG CTCACCACGA TTCCCTGACC GGTCTGGCCA ATCGCAGCCT CTTCCAGGAG CATCTGCGCC AGGCCCTGCG CCGTGCCCAG CGCCACGAAA GGGGGCTGGC CCTGGTGGTC TGTGACCTCG ACGGCTTCAA GCCCATCAAT GATCGCCTGG GCCACGATGC GGGGGACGTC GTGCTGGTGA CGGTGGCCGG GCGGCTGCGC GAAGGGGTGC GCGAGTGCGA TGTGGTGGCC CGTATGGGGG GCGACGAGTT TGTGATCCTG CTGGAGAACA TGGACGACCC GGATGCCCTG CTCGGGGTCG GTCTGAAGCT GATCGAACGC TTTGCCGAGC CCATCGAGGT CAATCGCGAG GCCGTGCAGG TGGGCTTGAG CATGGGGGCG GCCCTGTACC CGCATGACAG TGCCGATGCG GAGGGACTGA TGCTGCAGGC GGATCGTGCG ATGTATGCGG CCAAGGAGGC CGGGGGCGGC GGGATCGTGC TGTACGAGCA GGTCGATGCC AGCCGCGCCA GTCGGTCGCA CACACGACAT CGGCGGCGCG GGCCGCTGGG CTGCGGCCTT GGTCTGGAAG GCCCGTAG
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Protein sequence | MSVDRLRVPG ITSVFALVLL LVAAIAVFSW WRVQHLQQDI QTLTEEHIQK VDHVHRMRSL VRERVLRASL VVSAEDTALQ ERYYREFREL APRFVETLTA AESQAERPAD RQRMQELREL TSVGAPLLED IVDIALVGDR NEALGMLYAD LMPIQEEVLG QMERILEAFH RDNARAIEAM AQRHEQSQQW MLGATALAAV LIILLAAWVR YRLRRNHQAL QDELRERMRV EARLRETQGG LEAAVARRTA ALEETTARLE EAQRSAGAGF WDWDIRNGQL NWSAHVFELF GLDPRVDEAG FESYIHAVHP DDRTRVRRTI NQALASEAVY RVDHRVVRPD GGVRHVRVEG EIARDDAGRP LQVLGMVRDI TLEKASEERL WHQAHHDSLT GLANRSLFQE HLRQALRRAQ RHERGLALVV CDLDGFKPIN DRLGHDAGDV VLVTVAGRLR EGVRECDVVA RMGGDEFVIL LENMDDPDAL LGVGLKLIER FAEPIEVNRE AVQVGLSMGA ALYPHDSADA EGLMLQADRA MYAAKEAGGG GIVLYEQVDA SRASRSHTRH RRRGPLGCGL GLEGP
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