| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0521 |
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| Symbol | |
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| ID | 8806261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 546665 |
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| End bp | 548722 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_003459772 |
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| Protein GI | 289207706 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.799608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCC GCCGTAGCGA CGCCCTCCCG GACGAGGAGC GCGCGCGCCT GGAGGGCCTG
ATTTACGAGG AACGCGAGGC CCGACAACGT GCCGAATCCC TGGCCGAGAC CCGCCTGCAG
GACCTCTACG CGAAGCAGCA GCAGATCGAA CTGCTCAACA CGATCGCCTC CGCGGCCAAC
CAGTCCGACT CCATCGCTGA GGTTCTGCGC ACAGCCCTGA ACGCGATCGG GGAGTTCCTC
GACTGGCCAG TCGGCCACGC CTACCTCGCG CGCAAGACGT CCAGCAGCGA CCTGGAACTG
GGTCCCACGG GCATCTGGCA CCTGCGGACC CTCGACCCCG TCGAGGCGTT CCGCGAATCC
ACGGAGGACA CGGTCTTCCG GTCCGGCCAG GGCCTGCCCG GACGCGTCCT CGAACAGCGT
GCCCCGGTGT GGGTCGAGCA TCTGGATCAG GACCTCAATT TCCCCCGGCG CGCGGCGGCA
GCCACGAGCG GCCTGTGTTC GGGCTTTGCC TTCCCGGTCA TGGTCGGCCA GGAGGTGGCC
TGCGTGCTGG AGTTCTTCAC CGCCGAGACC ACGCCCGAGC AGCCGGAGGT CCTGGCCCTG
CTGGCGCAGG CCGGTGTGCA ACTGGGGCGC GTGGTCGAGC GCAACCGCCA CGCCGAACGG
CTGATCCACC ACGCCTCCCA TGATCCGCTG ACGGGCCTGC CGAACCGACG GCTCTTTCAT
GACCGTCTGG AGCACGCGAT CGCGCGCTAT GCGCGCGAGC CGGAGTCGCT GTTCGCCGTA
CTGTTCGTCG ACCTCGACCG CTTCAAGCTC GTCAACGACA GCCTCGGCCA TACGGCGGGC
GACGAGTTGC TGGCCCAGGT CGGCAAGCGC CTGCTGACCG CCCTGCGCCA GAACGACACC
GTCTCGCGGC CTGGGGGCAA CCAGAACACA AGACCGGACG ACACGCTGGC CCGTCTGGGC
GGTGACGAGT TCACCATACT GCTGGAGGGC CTGCACGAGC CGGTGGACGC ACTGCGCGTC
GCCGAGCGCC TGCAGGCCAT CCTGCACCAA CCCTTCTCGA TCGCCGGCCA GACCGTCTAT
GTAACGGTCA GCATCGGCAT CGCCACGCGC CCCTATGGCC AGGCCTGCCC GGTGGTCAGC
CCCGATCAGG ACGGTCCGAC CTGCGCGGAG GACCTGATGC GCGAGGCGGA CATGGCGATG
TATCGCGCCA AGTCGCTCGG CAAGGCCCGC TGCGAGTTCT GCGACCCGGG CATGCAGTCG
CAGGCACTCG AGAGCCTGCG ACTGGAAACC AGCCTGCGCG AATCGGTCGA GCGCAATGCC
TTTGTCGTGC ACTACCAGCC GATCATGTCA CTGGCAGACA ACCGCATTAC CGGGTTCGAG
GCCCTGGTAC GCTGGGAGCG AGAGGGCGAG CTCCTGCCCC CGGACCGGTT CATCCCGATC
GCGGAGGATG CCGGGCTGGT CCACCTGATC GACATGCAGG TGCTGTACAC GGCGTGCTCC
CAGCTACAAG CCTGGAATGC ACAACGCAGC GGCCCGCCGC TGACAATCAG CACCAACCTC
TCCGCACGGC AGCTCACCCG CCCCGAGCTG GTGGACGAGG TCGCCACAAT CCTGTGCGGC
ACCGACACCC CGCCGGAGCA GCTGCGCCTG GAAATCACCG AGACCGCGAC TCTGGGCAAC
CTCGACGAGC TGATCGCTAC CCTGAAGGGC CTGAAGGCCC TGGGGGTCAG TCTGGCAATG
GACGATTTCG GCACGGGCTA CTCGTCGCTC AGCTATCTCC ACCGCCTGCC GCTGGACATC
CTGAAGATCG ATCGCGCCTT CGTGGCCGGG CTGGATCGCG ACGAATACAG CCAGCGCCTG
GTGCAGACCG TGATCAACAT GGCGCGCAAC CTCGGGCTGG AGGCGGTGGC CGAGGGCGTC
GAGAGCAATA CCCATGCGGC CACCCTGCGC GCACTGGGGT GCACCCGCGC CCAGGGGTAC
TACTATTCCC GCCCGGTGCC CGCCGACCGG GCCGGCGACC TTCTGGCCGC CGACCAGCTC
CCGCTGGTCA CCGCCTGA
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| Protein sequence | MNRRRSDALP DEERARLEGL IYEEREARQR AESLAETRLQ DLYAKQQQIE LLNTIASAAN
QSDSIAEVLR TALNAIGEFL DWPVGHAYLA RKTSSSDLEL GPTGIWHLRT LDPVEAFRES
TEDTVFRSGQ GLPGRVLEQR APVWVEHLDQ DLNFPRRAAA ATSGLCSGFA FPVMVGQEVA
CVLEFFTAET TPEQPEVLAL LAQAGVQLGR VVERNRHAER LIHHASHDPL TGLPNRRLFH
DRLEHAIARY AREPESLFAV LFVDLDRFKL VNDSLGHTAG DELLAQVGKR LLTALRQNDT
VSRPGGNQNT RPDDTLARLG GDEFTILLEG LHEPVDALRV AERLQAILHQ PFSIAGQTVY
VTVSIGIATR PYGQACPVVS PDQDGPTCAE DLMREADMAM YRAKSLGKAR CEFCDPGMQS
QALESLRLET SLRESVERNA FVVHYQPIMS LADNRITGFE ALVRWEREGE LLPPDRFIPI
AEDAGLVHLI DMQVLYTACS QLQAWNAQRS GPPLTISTNL SARQLTRPEL VDEVATILCG
TDTPPEQLRL EITETATLGN LDELIATLKG LKALGVSLAM DDFGTGYSSL SYLHRLPLDI
LKIDRAFVAG LDRDEYSQRL VQTVINMARN LGLEAVAEGV ESNTHAATLR ALGCTRAQGY
YYSRPVPADR AGDLLAADQL PLVTA
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