| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0517 |
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| Symbol | |
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| ID | 8806257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 539061 |
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| End bp | 542279 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003459768 |
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| Protein GI | 289207702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.251594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCTGG AATCCACGCC ACTGACGCTG CTGTACGCGC TCAACGGGCT CGCGTTCTTC
ACCCTCGGCA TCGTGGCGCT GATGCTGCCG CGCCGCGAAC GGTTTGTGCC TTTCGCCGCT
CATGTCGGGT GGCTGGTGCC GTTCGGTCTG CTGCACGGGA CCTATGGTTT CCTCAACGCG
ATCGGCCTGC ATCACGAGTT GGGCGTACTC TCCGATCGCT GGTCCATGAC GGCCTGGCTG
GCGGTCTCCT ATCTGCCCCT GCTGGAGTTC GGTCGACGCG CGCTGCTCGA CATACGCCCC
GGCCTGCACC TGCCGGCCTG GGGCGTGTAC GGGAGTCTCG CCATCGGCCT GAGCGCGATA
CTCCTGGTCG CCGTTGAGCC GGCAACCGGG CTCGCCAATG GTGCCCGCTA CCTGATCGGG
TTCCCCGGCG CACTCCTCGC AGGGCTCGCA TTCCTGCTGC ACGTTCGTTC CCCGGGGGCA
CAGCCGGAGA TGCAGCGACA TATTCCGGCA CTGGGGATCG CAGCCCTCGC GTTTCTGGCC
TATGCCGCAT TTCTGCCTTT CCCGGCGCGG GTCGATCTCG GCCTTCCCCC ATGGCTTCCT
ACGCAGGGGG ATTTCCTGGC CGCGACCGGG GTGCCGATCC AGACCCTGCG CACCGGAGCC
GCGATGCTCT TCACCCTGGC GCTGATCAGC CTCGCGCGCA CCATCGGCGC GCAGCACAGC
GACGACTTGC TGCGGGTGCT GGAAACGGTC AACGGCTTTG TGTACCGCTG CCGCAACAAC
CCGCAGTGGG ACGTGATCTT CGTCGACGGC GGGGTGCGCG AACTGACCGG CTACGAGGCC
CGCGACTTTT ATCGGGGTGA CATCACCTTC GCCGCCTGGG TCCACCCGGA CGATTCCGAC
TACACCTGGG AGGGCGTGCA GGAAGGGCTC AAACAGGACG GCCACTACCA GATCCAGTAC
CGGGCGGTAA ACCGGGACGG CTCCGTGCGC TGGGTCTTCG AACGCGGGAC CGGCGTGTAC
GACGCACATG GGCACCTCAT CTATCTTCAG GGTCACGTGA TCGACGCCCA CGAGCTGGTC
ACCACCTCCC GCGAACTCGA ACGCCGCAGC GAGGAGCTCG AGGCCTTTCG CAGCACGCTG
GACCTGACGC TGGATGGCGT CTTCCTGTTT GACGTGGACA GCCTGCAGTT CATCTATGTC
AACCAGGGCG CGATGGACCA GACCGGTCGT ACTCGCAACG AATTGCTGCA GCTGCACCCG
TACGACATCA AGCCGGAGTT CCCCGAGACC CGTTTTCGCA GCATGCTGGA GCCCCTGCGG
CGAGGGGAGC GCGACCAGTT GCTGTTCGAG ACCACGCACC AGCACGTCGA CGGACACCTG
ATCCCGGTGC ACATCTCGCT ACAGCTGGTC GCCCCCCGGG GCGAGCGCCC GCGCTATGTC
GCCATCGTGC ACGACATCAG CCAGCGCAAG CGCAATGAAG AAGCCCTCCT GGAGGCGCTG
GAGAGCCTGG AGACCTCGCG CGACGAGCAG GCACGGTTGC TGGAACTCAC ACGGCGCGAG
CAGGGGCGCA TGGCCTCGCT GCTCTCGGCC ATGAGCATCG GCATCCTGTT CGAGGATCGC
CAGGGGTCCA TCGAGTACGT GAACCCCGCA TTTCGCCGCA TGTGGGCGAT CGCCGACGAG
GTCGATCTGG TCGGACAGCC CTCACGTGCC GTGCTGGAAC ATTCCACCCA TCGCTTTGCC
CGGCCCGACC ATGCCTCGCG GCATGTACTG CACGTCCTCG ACACCCACGA GATCAGCGAA
CGCTTCGAGG TGGACCTCTA TGACGGCCGC ATTCTCACGC AGCTGTCCTA TCCGGTACAC
GATGCCGACG AGCGCTCCAT TGGCCGACTG TGGCTGTACG AGGACGTCAC CCACGAGCGC
CAGACCGCCC AGCAGCTGGT CTATCTGGCC GAGCACGACC CGCTCACGGG CCTGTACAAC
CGCCATCGCT TCCAGCGCCA GCTGGAACAG GCGATCCACA CCGCCCGTCG CCGCGGGACC
CACCTGGCCC TGATCTATTT CGATCTCGAC GAGTTCAAGA CCATCAACGA CACCTTCGGC
CACCGCGCCG GAGACACCGT GCTGGTGCGC GCGGCAGGCG AGATCGCAAG CCTGGTGCGC
GAAGAGGAGA TCTTTGCCCG CCTGGGCGGC GACGAGTTCG CAATTCTGGT CGACCACGCA
GCCGAACGGG AACCTGAAGG ACTGGCCGAG CGGGTGGCAC GCGCGATCTC CGCAATCCCG
TTCCGCTTCC GCGGGCAAAA TTACCGCCTG ACCGCGAGCA TCGGCATCGC CCGCTACCCC
GAGCACGGAG ACAACGTCGA AGACCTGGTG GCCCATGCCG ATGCCGCGAT GTACCAGGCC
AAGGACTCGG GCAAGAACAC CTGGGCGGTA TTCGACGCCA GCCGCAACAC CGCCGAACGC
ATGCTCGAGC GGATGAGCTG GAGCCAGCGC ATCGGCAAGG CGCTGGAGGG CGGGCAGTTC
GAGTTGCACT TCCAGGGGAT CTACCACCTG GACAGCGGGG CGCTCAATCA CATGGAGGCG
CTGGTCCGCA TGCGCGACCC GCTGGCACCC GGCGAGGTGG TGATGCCGGG ACAATTCATC
CCCGTGGCCG AGAAGACCGG GCAGATCGTC GATATCGACC GCTGGGTGAT CCGCGAGAGC
ATCGCACACC TGGCCCGCCA GCCCGAGCTC CCGGGGATCG CGATCAACAT CTCCGGGCGC
AGTTTTGACG AACCCGGGCT GCCGCAATAC ATCACCAACG AGCTGAGCCA GCAGGGCGTC
GACCCTCGGC GGCTCGTCAT CGAACTGACC GAGACCGCGG CCGTCTCCGA GATGCAGGAC
GCCCAGCGCT TCATCGAGGC GTTGCAGCAG GCCGGCTGTC TTGTCTGCCT GGATGACTTT
GGATCGGGCT TCTCCACTTT TGCCTACCTC AAGTACCTGG GCGTCCAGGT GCTCAAGATC
GACGGCATGT TCGTGCGCGA TCTGCCGAAC AACCGCGACA ACCAGGCGTT CATCCGCGCG
ATGGTCGACG TCGCCCGCGG GCTGGACAAG TGGACCGTGG CCGAGTGCGT GGAAGACGGC
GACACCCTGG CGATGCTGGC CGACCTGGGG GTCGACATGG TCCAGGGTTA CCATCTGAAT
CGCCCCTCGC CGGGTTTCCC GCCGGACCGG GCCCCGTAG
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| Protein sequence | MGLESTPLTL LYALNGLAFF TLGIVALMLP RRERFVPFAA HVGWLVPFGL LHGTYGFLNA
IGLHHELGVL SDRWSMTAWL AVSYLPLLEF GRRALLDIRP GLHLPAWGVY GSLAIGLSAI
LLVAVEPATG LANGARYLIG FPGALLAGLA FLLHVRSPGA QPEMQRHIPA LGIAALAFLA
YAAFLPFPAR VDLGLPPWLP TQGDFLAATG VPIQTLRTGA AMLFTLALIS LARTIGAQHS
DDLLRVLETV NGFVYRCRNN PQWDVIFVDG GVRELTGYEA RDFYRGDITF AAWVHPDDSD
YTWEGVQEGL KQDGHYQIQY RAVNRDGSVR WVFERGTGVY DAHGHLIYLQ GHVIDAHELV
TTSRELERRS EELEAFRSTL DLTLDGVFLF DVDSLQFIYV NQGAMDQTGR TRNELLQLHP
YDIKPEFPET RFRSMLEPLR RGERDQLLFE TTHQHVDGHL IPVHISLQLV APRGERPRYV
AIVHDISQRK RNEEALLEAL ESLETSRDEQ ARLLELTRRE QGRMASLLSA MSIGILFEDR
QGSIEYVNPA FRRMWAIADE VDLVGQPSRA VLEHSTHRFA RPDHASRHVL HVLDTHEISE
RFEVDLYDGR ILTQLSYPVH DADERSIGRL WLYEDVTHER QTAQQLVYLA EHDPLTGLYN
RHRFQRQLEQ AIHTARRRGT HLALIYFDLD EFKTINDTFG HRAGDTVLVR AAGEIASLVR
EEEIFARLGG DEFAILVDHA AEREPEGLAE RVARAISAIP FRFRGQNYRL TASIGIARYP
EHGDNVEDLV AHADAAMYQA KDSGKNTWAV FDASRNTAER MLERMSWSQR IGKALEGGQF
ELHFQGIYHL DSGALNHMEA LVRMRDPLAP GEVVMPGQFI PVAEKTGQIV DIDRWVIRES
IAHLARQPEL PGIAINISGR SFDEPGLPQY ITNELSQQGV DPRRLVIELT ETAAVSEMQD
AQRFIEALQQ AGCLVCLDDF GSGFSTFAYL KYLGVQVLKI DGMFVRDLPN NRDNQAFIRA
MVDVARGLDK WTVAECVEDG DTLAMLADLG VDMVQGYHLN RPSPGFPPDR AP
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