Gene TK90_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0488 
Symbol 
ID8806228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp506080 
End bp506871 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003459739 
Protein GI289207673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.716115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATT CGGAAGAACA GATCACCTCG ACCCATCGCT GGTCGGACAA GACCTTCAGC 
TTCAAGACCA CGCGCCCGGA AGGCCTGCAG TTCAAGAACG GGCAGTTCGT GACGCTGGGG
CTGCGCCCCG AGGGCAAGCT GATCCCGCGC GCCTATTCGA TCGTCTCCGA GCCCGAGGCC
GAGGAACTGG AGTTTCTGAG CATCCACGTG CCCGACGGCG CGTTGACCAG CCGCCTGGCC
CAGGCCGGGC CGGGCGATTC AGTCTGGATC AACACCAAGG TCACGGGCTC GCTGACCTTC
GACTACGTGC AGCCCGGACG CACCCTGTAC ATGCTGGCCA CCGGCACGGG GCTGGCGCCG
TTCATCTCGC TGATCCGCAG CCCGGAACTG TTCGAACACT TCGAAAACGC GGTGCTGGTG
CACAGCGTGC GTACCGTCGA GGAGCTGGCC TATCGCCAGG AAATCGAGTC ACGCATCAGC
GACCGGCTGC GCTACGTACC GACGGTCACC CGCGAGAACC ACGACTTTGC CTGCCCGATC
GCGCAGCAGC CGTATGACAA CAACCAGCGC GGGGCCGACA TGTTCCGCTC CGGCGAACTG
TTCCAGATCC TCAACCTGCC CCCGGCGGAT CCGGAGCACG ACCGCGTGAT GCTCTGCGGC
AACCCGGCGA TGAACCGCGA AATGAGCGAA TGGCTGGTCG AACATGGCTG GACCCAGACG
AACTACAAGG GGGTCGGCAA CTTCACCGTG GAGCAGGCCT TCGTGACCAC GATGTCCGAC
TCGGACGACT GA
 
Protein sequence
MPYSEEQITS THRWSDKTFS FKTTRPEGLQ FKNGQFVTLG LRPEGKLIPR AYSIVSEPEA 
EELEFLSIHV PDGALTSRLA QAGPGDSVWI NTKVTGSLTF DYVQPGRTLY MLATGTGLAP
FISLIRSPEL FEHFENAVLV HSVRTVEELA YRQEIESRIS DRLRYVPTVT RENHDFACPI
AQQPYDNNQR GADMFRSGEL FQILNLPPAD PEHDRVMLCG NPAMNREMSE WLVEHGWTQT
NYKGVGNFTV EQAFVTTMSD SDD