| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0378 |
|---|
| Symbol | |
|---|
| ID | 8806113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 397064 |
|---|
| End bp | 398368 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_003459629 |
|---|
| Protein GI | 289207563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.195282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.400901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCA TTGCCCGACT CGATACCCAG CAGCCCGACT TCGATCAGGC CCTGGAGCAC
CTGCTGTCCT GGGAGTCCGT CGCCGACACC GGCGTACGTG ATGCGGTGGA CGAGATCCTC
GCCGCGGTGC GCACGGAGGG GGACGCGGCC GTTCTGCGCT ACACCGCCAA GTTCGATCGC
CTCGATCGCA GCGCGGTCGC CGACCTGGAG ATCCCGCGGG AGCGCCTGCA GGCCGCGCTG
GAATCCATCC CGGCGGAGCA GCGCCAGGCG CTGGAGACCG CCGCCACGCG CATCCGCCAG
TACGCCGAAC ACCAGAAGAT GCAGGACTGG GACTTCACCG ACGAAGACGG AACGGTGCTC
GGCCAGCGCG TAACCGCGCT GGATTCCGTT GGCCTGTATG TGCCCGGCGG CAAAGCGGCC
TACCCCTCCT CCGTGCTGAT GAACGCGATA CCGGCGAAGG TCGCCGGTGT GGAACTGCTG
GTAATGGTTG TGCCCGCCCC GGGCGGCGAG CTGAACGATC TGGTGCTGGC CGCCGCCGCG
GTGGCGGGCG TCGATCGCGT CTACACCATC GGCGGCGCCC AGGCGGTGGC CGCGCTGGCC
TACGGCACCC AGACCATCCC GGCGGTGGAC AAGATCGTCG GCCCCGGCAA CATTTTCGTC
GCGGCGGCCA AGCGCGAGGT GTTCGGCACG GTCGGGATCG ACATGATCGC CGGCCCCTCG
GAGATCCTGG TGGTCTGTGA CGGTGAAACG GACCCGGACT GGATCGCGGC CGACCTGTTC
TCGCAGGCCG AACATGACGA ACAGGCCCAG TCCATCCTGC TGTCCTGGGA CGAGGCCTTT
CTCGACCGCG TGGCCGAGGC GATGGACCGC CTGCTGGCCG AAATGCCACG CGCCGAGATC
ATCCGCACCA GCCTCGACAA GCGCGGGGCA CTGGTGAAGG TACGCGACTC CTCCGAGGCC
ATCGCCGTCG CCAACCGCAT CGCCCCGGAA CACCTGGAGC TGTCCGTGGC CGACCCGCAG
GCCATGCTGG ACGCCGGCCT GCGCCACGCC GGCGCGATCT TCATGGGGCG CTACACCTCC
GAAGCCCTGG GCGATTACTG CGCCGGGCCC AACCATGTGC TGCCAACCTC GCGCACCGCA
CGCTTCTCCT CGCCGCTGGG GGTGTACGAC TTCCAGAAGC GCTCGAGCAT CATCCACTGT
TCGGCCGAAG GCGCGGCGAA GCTCGGCCAG ACCGCCGCCG CCCTCGCGCA CGGCGAGGGG
CTTACCGCCC ACGCTCGCTC CGCCGAACTG CGCGGCGGGC AATGA
|
|---|
| Protein sequence | MPSIARLDTQ QPDFDQALEH LLSWESVADT GVRDAVDEIL AAVRTEGDAA VLRYTAKFDR
LDRSAVADLE IPRERLQAAL ESIPAEQRQA LETAATRIRQ YAEHQKMQDW DFTDEDGTVL
GQRVTALDSV GLYVPGGKAA YPSSVLMNAI PAKVAGVELL VMVVPAPGGE LNDLVLAAAA
VAGVDRVYTI GGAQAVAALA YGTQTIPAVD KIVGPGNIFV AAAKREVFGT VGIDMIAGPS
EILVVCDGET DPDWIAADLF SQAEHDEQAQ SILLSWDEAF LDRVAEAMDR LLAEMPRAEI
IRTSLDKRGA LVKVRDSSEA IAVANRIAPE HLELSVADPQ AMLDAGLRHA GAIFMGRYTS
EALGDYCAGP NHVLPTSRTA RFSSPLGVYD FQKRSSIIHC SAEGAAKLGQ TAAALAHGEG
LTAHARSAEL RGGQ
|
|---|
| |