| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0346 |
|---|
| Symbol | |
|---|
| ID | 8806081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 366690 |
|---|
| End bp | 367376 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
|---|
| Protein accession | YP_003459597 |
|---|
| Protein GI | 289207531 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.246778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA GTTTTACCAT TGAAGCCGAA AAGCGGGACG AGCAGGGATC GAGTGCGAGC
CGCCGCCTGC GTCGCGCCGG CAAGCTGCCC GCCATCCTGT ACGGTGGCGA GAATGACGCG
CAGCCGATCA CCCTCGACCA CAACGCGATG GTGCACAACC TGAAGCATGA TGCGTTCTAC
TCGCACATCC TGACGGTCAA GCTGGATGGC AAGAGCGAGA AGGCGATCCT GCGCGACGTG
CAGCGTCACC CGTTCAAGCC GACCATCTAT CACGTTGACC TGCTGCGTGT GTCCGCGAAC
CAGCCGATCC GCGTGCATGT GCCGCTGCAC TTCCACAACG AGGAAGAGTG CAAGGGCGTG
AAGCTGGGTG GTGGCATGGT CAGCCGTATG CTGAACGACA TCGAAGTCGA GTGCCTGCCG
GGCGACCTGC CCGAGTCCAT CGACATCGAT GTGGCCGAGA TGGACGTCGG TGACACCATC
CACATCTCCG AGCTGAAACT GCCGAAGGGT GTGGAGAGCG TGGCCCTGAT GCATGGCGAT
GACTACGACT ACGCCGTGGT CAGTGTCCTG CTCCCGCGTG CCGCGAAGGC CGAAGAGGAA
GACGGCGAGG AAGTCGAAGC CGCCGAGGCC GAGGGTGGCG AAGAGGCAGC CTCCGGCGAC
GAAGGCGAGT CCGAGGACAA GGAATAA
|
|---|
| Protein sequence | MSMSFTIEAE KRDEQGSSAS RRLRRAGKLP AILYGGENDA QPITLDHNAM VHNLKHDAFY
SHILTVKLDG KSEKAILRDV QRHPFKPTIY HVDLLRVSAN QPIRVHVPLH FHNEEECKGV
KLGGGMVSRM LNDIEVECLP GDLPESIDID VAEMDVGDTI HISELKLPKG VESVALMHGD
DYDYAVVSVL LPRAAKAEEE DGEEVEAAEA EGGEEAASGD EGESEDKE
|
|---|
| |