Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0292 |
Symbol | |
ID | 8806023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 304507 |
End bp | 306165 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | chaperonin GroEL |
Protein accession | YP_003459543 |
Protein GI | 289207477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0385271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTA AAGAAGTCCG TTTTGGTAAC GACGCCCGCA CCCGCATGGC CAAGGGCGTG AACACTCTGG CCAACGCCGT GAAGGTCACC CTCGGTCCGA AGGGCCGCAA CGTGGTCCTG GACAAGGCCT TCGGCGCCCC GACCGTGACC AAGGACGGTG TGTCCGTGGC CAAGGAGATC GAACTGGATG ACAAGTTCGA GAACATGGGC GCCCAGCTGG TCAAGGAAGT CTCCTCGCAG ACCTCCGACG CCGCCGGTGA CGGCACCACC ACCGCAACCG TGCTGGCCCA GTCCATCGTC CGCGAAGGCA TGAAGGCGGT CACCGCCGGC ATGAACCCGA TGGACCTGAA GCGTGGTATC GACAAGGCCG TGAAGTCCGC GACCGAAGAG CTGAAGAAGC TGTCCAAGCC GTGCACCGAG CACAAGGCGA TCGCCCAGGT GGGCTCGATC TCCGCGAACT CCGATACGGC GATCGGCGAG ATCATCGCCG ATGCGATGGA CAAGGTCGGC AAGGAAGGCG TGATTACCGT CGAGGAAGGT TCCTCGCTGG AAAACGAGCT GGATGTCGTG GAAGGCATGC AGTTCGACCG CGGCTACCTG TCGCCGTACT TCATCAACAA CCAGCAGAAC ATGAGCGCCG AGCTGGACGA CGCCTACATC CTCCTGTTCG ACAAGAAGAT CTCGAACATC CGTGATCTGC TGCCGATCCT GGAAGGCGTG GCCAAGTCCA ACAAGCCGCT GCTGATTATC GCCGAGGACA TCGAGGGCGA GGCCCTGGCC ACGCTGGTGG TGAACTCCAT GCGCGGCATC GTGAAGGTGG CCGCCGTTAA GGCCCCGGGC TTTGGCGACC GCCGCAAGGC CATGCTGCAG GATATCGCGG TGCTGACCGG CGGCCAGGTG ATCTCCGAAG AGGTCGGTCT GTCGCTGGAG AAGACCACGG TGGAAGACCT GGGTCGTGCC AAGAAGGTGC AGGTGACCAA GGAAAACACC ACGATCATCG ATGGCATGGG TCAGAACAAG GACATCAAGG CCCGCGTCGA CCAGATCCGT ACCCAGATCG AGGAAGCGAC CTCCGACTAC GACAAGGAAA AGCTGCAGGA ACGCGTGGCC AAGCTGGCCG GCGGTGTTGC GGTGATCAAG GTCGGTGCCG CCACCGAGGT CGAGATGAAG GAGAAGAAGG CCCGCGTCGA GGATGCTCTG CACGCCACGC GTGCGGCCGT CGAGGAAGGC GTGGTCCCTG GCGGTGGCGT GGCCCTGCTG CGTGCCTGCG CGGCGATCGC CAAGCTCAAG GGTGAGAACG ACGAGCAGAC CGCCGGCGTG AACATCGCTC GTCGCGCGAT GGAAGAGCCG CTGCGCCAGA TCGTCTACAA CACCGGCGAA GAGCCTTCCG TGATCCTGAA CAAGGTCCTG GAAGGCAAGG GCAACTACGG CTACAACGCC GCGTCCGGCG AGTTCGGCGA CATGATCGAG ATGGGGATCC TGGATCCGAC CAAGGTGACC CGTTCCGCGC TGCAGAACGC CGCGTCCGTG GCCGCCCTGC TGATCACCAC CGAGGCCATG GTGGCCGAGC TGCCGAAGAA GGACGACGGC GGTGCCGGCG GCGGCATGGA CGACATGGGT GGTATGGGCG GTATGGGAGG CATGGGCGGC ATGATGTAA
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Protein sequence | MSAKEVRFGN DARTRMAKGV NTLANAVKVT LGPKGRNVVL DKAFGAPTVT KDGVSVAKEI ELDDKFENMG AQLVKEVSSQ TSDAAGDGTT TATVLAQSIV REGMKAVTAG MNPMDLKRGI DKAVKSATEE LKKLSKPCTE HKAIAQVGSI SANSDTAIGE IIADAMDKVG KEGVITVEEG SSLENELDVV EGMQFDRGYL SPYFINNQQN MSAELDDAYI LLFDKKISNI RDLLPILEGV AKSNKPLLII AEDIEGEALA TLVVNSMRGI VKVAAVKAPG FGDRRKAMLQ DIAVLTGGQV ISEEVGLSLE KTTVEDLGRA KKVQVTKENT TIIDGMGQNK DIKARVDQIR TQIEEATSDY DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALL RACAAIAKLK GENDEQTAGV NIARRAMEEP LRQIVYNTGE EPSVILNKVL EGKGNYGYNA ASGEFGDMIE MGILDPTKVT RSALQNAASV AALLITTEAM VAELPKKDDG GAGGGMDDMG GMGGMGGMGG MM
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