Gene TK90_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0280 
Symbol 
ID8806011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp294839 
End bp295381 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID 
ProductShikimate kinase 
Protein accessionYP_003459531 
Protein GI289207465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.129636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATA TTGTCCTGGT GGGGCCCATG GGGGCCGGCA AGAGTACGAT CGGGCGCGGG 
TTGGCGGGGC TGTTGCGCCG TCCGTTTTTC GACACGGATC AGGAGATCCA GCGGCGTACG
GGCGTGGATA TCCCCACGAT CTTCGAGTTC GAGGGCGAGG CAGGCTTTCG CAAGCGCGAA
TCGGCGATGC TGGAATCGTT GCTGGAACGT GACGGTATCG TGATCGCGAC GGGTGGCGGG
ATCGTCGAGC GCCCGGAGAA CCGCGAGCGC TTGCGCGAGC ATTTCGTGAT CTACCTGCGC
GTCCCGGTGG ATGAACAGTT CCGGCGCACG CGGCGCAATC GCAAACGCCC CCTGCTGAAC
GAGGTGGCAG ACCCAAGGGC CAAGCTTCAG GAGCTGTTCG AGCGCCGTGA TCCGCTTTAT
CGGGAGATTG CGAGTATGAC GCTGGAGGGG CGGGGACGAC GCGTACGCGA TGCCGTTCGC
GGGGTCTGTG ATGCCCTGAA GGTCCAGCGC CCGGATCTGT GTCAGCCCCG CTCAGAGGGC
TGA
 
Protein sequence
MQNIVLVGPM GAGKSTIGRG LAGLLRRPFF DTDQEIQRRT GVDIPTIFEF EGEAGFRKRE 
SAMLESLLER DGIVIATGGG IVERPENRER LREHFVIYLR VPVDEQFRRT RRNRKRPLLN
EVADPRAKLQ ELFERRDPLY REIASMTLEG RGRRVRDAVR GVCDALKVQR PDLCQPRSEG