Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0280 |
Symbol | |
ID | 8806011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 294839 |
End bp | 295381 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Shikimate kinase |
Protein accession | YP_003459531 |
Protein GI | 289207465 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.129636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAATA TTGTCCTGGT GGGGCCCATG GGGGCCGGCA AGAGTACGAT CGGGCGCGGG TTGGCGGGGC TGTTGCGCCG TCCGTTTTTC GACACGGATC AGGAGATCCA GCGGCGTACG GGCGTGGATA TCCCCACGAT CTTCGAGTTC GAGGGCGAGG CAGGCTTTCG CAAGCGCGAA TCGGCGATGC TGGAATCGTT GCTGGAACGT GACGGTATCG TGATCGCGAC GGGTGGCGGG ATCGTCGAGC GCCCGGAGAA CCGCGAGCGC TTGCGCGAGC ATTTCGTGAT CTACCTGCGC GTCCCGGTGG ATGAACAGTT CCGGCGCACG CGGCGCAATC GCAAACGCCC CCTGCTGAAC GAGGTGGCAG ACCCAAGGGC CAAGCTTCAG GAGCTGTTCG AGCGCCGTGA TCCGCTTTAT CGGGAGATTG CGAGTATGAC GCTGGAGGGG CGGGGACGAC GCGTACGCGA TGCCGTTCGC GGGGTCTGTG ATGCCCTGAA GGTCCAGCGC CCGGATCTGT GTCAGCCCCG CTCAGAGGGC TGA
|
Protein sequence | MQNIVLVGPM GAGKSTIGRG LAGLLRRPFF DTDQEIQRRT GVDIPTIFEF EGEAGFRKRE SAMLESLLER DGIVIATGGG IVERPENRER LREHFVIYLR VPVDEQFRRT RRNRKRPLLN EVADPRAKLQ ELFERRDPLY REIASMTLEG RGRRVRDAVR GVCDALKVQR PDLCQPRSEG
|
| |