| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0242 |
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| Symbol | |
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| ID | 8805972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 243102 |
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| End bp | 243818 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003459493 |
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| Protein GI | 289207427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.206504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.26673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC GCGTGGTAGT GATCGAGGAC GACCTGGCTC TGCGCAGCCA GATCGCCGAG
GAGATGGAGA ACAACGGCTG CCGCGTGGAT ACCGCCTCGG ATGGCGACAC CGGCCTGTAC
CTGCTGACCG AATACCACTG CGACATCGCG GTGGTGGACC TGGGGCTGCC GGGCATGGAC
GGGCTCGACG TCATTCGCAA GGCCCGCGAG GTGAAACCGC AGCTGCCCAT CCTGATCCTC
ACCGCCCGTG ACCGCTGGCA GGACAAGGTC GAAGGGCTTG AGGCCGGGGC CGACGACTAC
CTGACCAAGC CGTTTCACAT CCAGGAGCTG GTGGCGCGCC TGCGTGCCCT GGCGCGCCGC
AGCCTGCAGG CCGGCCGCGA ACAACTGCAG TTCGGGCCGC TGGTGATCGA CACCGCCACC
GACGATGTCC GCCTGAACGA CGAGCCGGTC TCGCTGACCA CCTTCGAGTA CCGCCTGCTG
CTGACGCTGG TGCGCCAGCC GGGGCGCGTG CTGAGCAAGG AAGTGCTGGC GGACTACCTC
TACGAGCACG ACGAGGATCG CGAGAGCAAC GTGATCGAGG TGCTGATTGG CCGCCTGCGC
CGCAAGCTGG ACCCGGGCGG CAGCCTGGGG CTGATCGAGA CCCTGCGCGG TCGGGGCTAC
CGCTTCGTGC GCGAGGCGGA TACCGCGACC CCGTCGGATT CCACCTCGGG CTCATGA
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| Protein sequence | MNLRVVVIED DLALRSQIAE EMENNGCRVD TASDGDTGLY LLTEYHCDIA VVDLGLPGMD
GLDVIRKARE VKPQLPILIL TARDRWQDKV EGLEAGADDY LTKPFHIQEL VARLRALARR
SLQAGREQLQ FGPLVIDTAT DDVRLNDEPV SLTTFEYRLL LTLVRQPGRV LSKEVLADYL
YEHDEDRESN VIEVLIGRLR RKLDPGGSLG LIETLRGRGY RFVREADTAT PSDSTSGS
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