Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0182 |
Symbol | |
ID | 8805912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 190432 |
End bp | 194223 |
Gene Length | 3792 bp |
Protein Length | 1263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | methionine synthase |
Protein accession | YP_003459434 |
Protein GI | 289207368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCAA CGCGAAACGA CATCGAGAAA GCGCTGAAAG AGCGCATCCT GATTCTGGAC GGCGGGATGG GCACGACCAT CCAGCTGTAC AAGCTGGAGG AGGCCGACTA TCGCGGCGAG CGCTTCAAGG ACTGGGAATC CGACCTGAAG GGCAACAACG ACCTGCTGTC GCTGACCCGT CCGGACATCA TCGAGCAGAT CCACAACGAC TATCTCGAGG CCGGCGCCGA CATCATCGAG GCCAACACCT TCAACGGTAC CCGCATCGCG ATGGCGGACT ACCACATGGA GGACCTGGTC CCCGAGCTGA ACCGCGAATC CGCGAAGCTC GCGCGCAAGG CCGCCGATGC CTGGACCGAG AAGACCCCGG ACAAGCCGCG TTACGTGGCT GGCATCCTCG GCCCGACCAA CCGTACCGCG TCGATCTCCC CGGACGTGAA CGACCCGGGC GCGCGCAACG TCGATTTCGA CACCCTGGTC GAGTCCTACA AGGAGGCCGC CGAGGCCCTG GTCGAGGGCG GGGTGGATAT CCTGCTGATC GAGACGGTCT TCGACACCCT GAACGCCAAG GCCGCGATCT TCGCGGTGAA GACGCTGGAA GACGAGCTCG GGAAGGAACT TCCGATCATG ATCTCCGGCA CCATCACCGA CGCCTCCGGC CGTACCCTGT CCGGTCAGAC CACCGAGGCC TTCTGGAACT CGGTGCGTCA CGCGAACCCG GTCTCCATCG GCCTGAACTG CGCGCTGGGC GCGAAGGAAA TGCGCCAGTA CGTGGAAGAG CTGTCGCGCA TTGCCGACAC CCACGTCTCC GCGCACCCCA ACGCCGGTCT GCCGAACGAG TTCGGTGACT ACGACGAATC CCCGGAGCAG ATGGCTGCGG ACGTCGGCCC CTGGGCCGAG CAGGGCCTGC TGAACATCAT CGGCGGCTGC TGCGGCACGC TGCCGGAGCA CATCCGCGCG ATGCGCGAGG CGGTGGAGAA GTTCCCGCCG CGCAAGGTGC CGGAGATCGC CCCGGCCTGC CGTCTGTCCG GCCTCGAGCC GTGCAACATC ACCGACGACT CGCTGTTCGT GAACGTCGGC GAGCGCACCA ACGTGACCGG CTCGCGCAAG TTCCTGCGCC TGATCCAGAA CGAGGAATAC GACGTCGCGC TGGAAGTCGC GCTGAACCAG GTCGAGGGCG GCGCCCAGAT CATCGACATC AACATGGACG AGGGGATGCT GGAGTCGCAG GACGCGATGG TCCGCTTCCT GAATCTCTTG GCTGGTGAGC CGGACATCGC CCGCGTGCCG GTGATGATCG ACTCCTCCAA GTTCGAGATC ATCGAGGCCG GCCTGAAGTG TGTGCAGGGC AAGGCGGTGG TCAACTCGAT CTCCATGAAG GAGGGCGAGG AGAACTTCAT CAAGCAGGCC CAGCTGTGCC GTCGCTACGG CGCCGCGATC GTGGTCATGG CCTTCGACGA GGACGGCCAG GCCGATAACG AAGACCGCCG CGTCGAGATC TGCACCCGTG CCTACAGGCT GCTGACCGAG AAGGTCGGCT TCCCGGCCGA GGACATCATC TTCGACCCGA ACATCTTCGC GGTCGCGACC GGTATCGAGG AGCACAACAA CTACGGCGTG GACTTCATCG AGGCCACCCG TCGCATCAAG CAGGACCTGC CGCACGCGCT GGTCTCCGGC GGCGTGTCCA ACGTGTCGTT CTCCTTCCGC GGTAACGAGC CGGTGCGCGA GGCGATCCAC GCGGTGTTCC TGTACCACGC CATCAAGGCG GGCATGGACA TGGGGATCGT CAACGCCGGC CAGCTGGCGG TCTATGACGA CATCGACGAG AAGCTGAAGG AAGCGGTCGA GGACGTGGTC CTGAACCGTC GCGATGACGC GACCGAGCGA CTGCTTGACC TGTCCGAGGA GTACAAGGGC CAGGGCGGCG GCAAGAAGGA AGAGAACCTC GAGTGGCGCG AATGGGAAGT CACCAAGCGC CTCGAGCACT CGCTGGTCAA GGGCATCGAC ACCTACGTGG TCGAGGATAC CGAAGAGGCG CGTCAGCAGT ACGACCGCCC GATCCAGGTG ATCGAGGGCC CGCTGATGGA CGGCATGAAC GTGGTCGGCG ACCTGTTTGG CGAGGGCAAG ATGTTCCTGC CGCAGGTGGT CAAGTCCGCG CGCGTGATGA AGAAGGCCGT GGCCCACCTG ATCCCGTACA TCGAGGCCGA GAAGACCGGC ACCGAGAACA ACGGCAAGAT TCTGATGGCC ACGGTGAAGG GCGACGTCCA CGACATCGGC AAGAACATCG TCGGCGTGGT CCTGCAGTGC AACAACTTCG AGGTCATCGA CATCGGCGTG ATGCAGCCCG GTGCGGAGAT CCTGAAGGCG GCCAAGGAGC ATGACGTCGA CGTCATTGGC CTGTCCGGCC TGATCACCCC CTCGCTGGAG GAGATGGCCA ACTTCGCCGC AGATCTCGAG CGCGAAGGCA TGACGACGCC GCTGATGATC GGGGGTGCCA CCACCTCGCG CGCCCACACC GCGGTCAAGA TCGAGCCGAA CTACTCCGGC CCGGTGGTCT GGGTGAAGGA CGCCTCGCGC GCGGTGGGCG TGGCCCAGAG CCTGATCAGC CCCGAACTGC GCGAGAACTA CGCCGCCGAG ATCCGCGAGG AATACGAAAA ACTGCGCGTG CAGAACGCCG GGCGCAAGAA GAAGACCCAG TGGGTCACCC TGGAGAAGGC GCGCGCCAAC AAGCCGCAGA TCGACTGGTC GAGCTATACC CCGACCAAGC CGAAGGCGCT GGAAACCGAC AAGCTGCCGG GCGAGCCGAA GGTGCTGCAC CCGCATGGCG ACGGCTCCGT GCTGCTGCGC TTCGACGACT TCGACCTGAA CGAGGTCAGG AACTTTATCG ACTGGACGCC GTTCTTCCAC TCCTGGCAGC TGCACGCCGC CTACCCGCGC ATCCTCGATG ACGAGAAGGT GGGCGAAGAG GCGCGCAAGC TATTCAAGGA TGGCCAGGAG ATGCTCGATC GCATGATCGA GGAGAAGTGG GTCACCCTGC GTGGTGTAGT CGGCTTCTTC CCGGCGAATA CCGTCAATGA TGACGACATC GAGGTCTACA CCGACGAGAG CCGCTCGAAG GTGCTGAAGA AGCTGCACCA CCTGCGTCAG CAGACCGAGA AGCGCCGTGG TCAGCCGAGC CACTCGCTGG CCGACTTCCT GATGCCGAAG GAGGCTGGTG GTCCGGACTA CCTGGGTGCG TTTGCGGTCA GCGCCGGTGG CGACGTCGAT GCCAAGGCCG AGGAATACGA GAAGGCCAAC GACGATTACC ACGCGATCCT CGTGAAGAGC CTGGCGGACC GTCTGGCCGA GGCCTTTGCC GAGTGCATGC ACCAGTATGT GCGCAAGCAC TACTGGGGCT ATGTCCCGGA CGAGGCGCTC GAAAACGAAG ACCTGATCGA CGAGAAGTAC CAGGGCATCC GTCCGGCCCC GGGCTACCCG GCCTGCCCCG AGCACACCGA GAAGGGCACG CTCTGGGAAC TGCTGCAGGC CGACGAGCAC GCGGACATGA CGCTCACCGA GAGCTACGCG ATGCTGCCGG TCTCGGCCGT ATCGGGCTGG TACTTCGCCC ATCCGGAGTC GCGCTACTTC GGTCTGGGCA AGGTCAACCG CGACCAGGTC GAGGACTACG CCAAGCGCAA GGGCATGTCG TTCGAGGAGG CCGAGCGCTG GCTCGCGCCG AACATCGGCT ACGACGACAG CGACGAGGCC AAGGCGGAAG CCAGGGCCGA GCGCGAGGCC CGGTCGGCCT GA
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Protein sequence | MTATRNDIEK ALKERILILD GGMGTTIQLY KLEEADYRGE RFKDWESDLK GNNDLLSLTR PDIIEQIHND YLEAGADIIE ANTFNGTRIA MADYHMEDLV PELNRESAKL ARKAADAWTE KTPDKPRYVA GILGPTNRTA SISPDVNDPG ARNVDFDTLV ESYKEAAEAL VEGGVDILLI ETVFDTLNAK AAIFAVKTLE DELGKELPIM ISGTITDASG RTLSGQTTEA FWNSVRHANP VSIGLNCALG AKEMRQYVEE LSRIADTHVS AHPNAGLPNE FGDYDESPEQ MAADVGPWAE QGLLNIIGGC CGTLPEHIRA MREAVEKFPP RKVPEIAPAC RLSGLEPCNI TDDSLFVNVG ERTNVTGSRK FLRLIQNEEY DVALEVALNQ VEGGAQIIDI NMDEGMLESQ DAMVRFLNLL AGEPDIARVP VMIDSSKFEI IEAGLKCVQG KAVVNSISMK EGEENFIKQA QLCRRYGAAI VVMAFDEDGQ ADNEDRRVEI CTRAYRLLTE KVGFPAEDII FDPNIFAVAT GIEEHNNYGV DFIEATRRIK QDLPHALVSG GVSNVSFSFR GNEPVREAIH AVFLYHAIKA GMDMGIVNAG QLAVYDDIDE KLKEAVEDVV LNRRDDATER LLDLSEEYKG QGGGKKEENL EWREWEVTKR LEHSLVKGID TYVVEDTEEA RQQYDRPIQV IEGPLMDGMN VVGDLFGEGK MFLPQVVKSA RVMKKAVAHL IPYIEAEKTG TENNGKILMA TVKGDVHDIG KNIVGVVLQC NNFEVIDIGV MQPGAEILKA AKEHDVDVIG LSGLITPSLE EMANFAADLE REGMTTPLMI GGATTSRAHT AVKIEPNYSG PVVWVKDASR AVGVAQSLIS PELRENYAAE IREEYEKLRV QNAGRKKKTQ WVTLEKARAN KPQIDWSSYT PTKPKALETD KLPGEPKVLH PHGDGSVLLR FDDFDLNEVR NFIDWTPFFH SWQLHAAYPR ILDDEKVGEE ARKLFKDGQE MLDRMIEEKW VTLRGVVGFF PANTVNDDDI EVYTDESRSK VLKKLHHLRQ QTEKRRGQPS HSLADFLMPK EAGGPDYLGA FAVSAGGDVD AKAEEYEKAN DDYHAILVKS LADRLAEAFA ECMHQYVRKH YWGYVPDEAL ENEDLIDEKY QGIRPAPGYP ACPEHTEKGT LWELLQADEH ADMTLTESYA MLPVSAVSGW YFAHPESRYF GLGKVNRDQV EDYAKRKGMS FEEAERWLAP NIGYDDSDEA KAEARAEREA RSA
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