| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0174 |
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| Symbol | |
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| ID | 8805904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 179151 |
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| End bp | 180776 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003459426 |
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| Protein GI | 289207360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.525828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAC CGTCTTCAAG CCCGGGGCTG AACCAGACCC GGATCGCCGG CTTCGGCATC
ATCTGCAGCC CGGTGTTCTG GATTTCCAGT GCCGTGATCG CCGCATTCGT TCTGTTCGGG
GCGGTTTTCC CGGACACGGC GGAGGAGATC TTCGAGAAGC TGCAGACCGG CATCTCCGAA
TACCTCGGCT GGTACTACAT GCTGGTGGTG ACGGTCTTCC TGATCTTCTC TCTGTACCTG
ATGTTTTCGC GCTACGGGGG CATACGGCTC GGAGACCAGT TCGAGGCGCC GCGTTTCAGC
TATGCCGCGT GGTTCGCGAT GCTCTTCTCC GCAGGCATGG GGATCGGACT GCTGTTCTGG
AGCATTGCCG AGCCGATGTA CCACTACCTG GATCCGCCGC ATGCCGATGG CGAGACCAGC
GAGGCCGCGA CCGAGGCGAT GCGCTACACC TTCTTCCACT GGGGGCTGCA TGCCTGGGCG
ATCTACATCG TCGTTGGCCT GTCGCTGGCC TACTATGCCT ACCGGCACAA CCTGCCGCTG
CTGATCCGTT CCTCGCTGTA TCCGTTCATC GGTGACCGCA TCTATGGCCC CTGGGGGCAC
CTGATCGACA TCCTGGCCCT GTTCGGGACC ATGTTCGGGG TGGCCACCTC GCTGGGTCTC
GGGGTCATGC AGATCAACTC GGGCCTGAAC TACGTGTTCG GGATCGAGGA ATCCACGGCC
ATGCAGATCA TCCTGGTCGC GATCATCACC CTGATCGCGG TGGGCTCGGT GGCACTGGGG
ATCGACAAGG GCATCAAGCG GCTGTCGAAC TTCAACATCG GGCTGGCGGT GATCCTGCTC
GCCCTGTTGC TGATCATGGG GCCGACACTG TTCATCCTGC GCGTGCTGGT GGAGTCGACC
GGCGTCTACG TGCAGCACTT GCCCGAGATG AGCCTGTGGG CCGATACCAT CGACGAGACC
GGCTGGGCCA CCGTCTGGAC CATCTTCTAC TGGGGCTGGT GGATCTCCTG GGCGCCGTAT
GTCGGCATGT TCATCGCCCG CGTCTCGCGC GGGCGCACGA TCCGGGAATT CGTGGCCGGC
GTGCTGCTGG CCCCGACCGC TGCTGCCTTT GTCTGGCTGG CCGTGTTCGG CGGTACCGCG
ATGGGCTACG AGCTGGGTGG CGTGGCCAAT ATCTCCGGCG CGGTCGAAGA GAGCGTGTCC
ACCGCGTTGT TCGCGACCAT CGAGGCGATG CCGCTGTGGG ACTGGCTGGC GGTGCTGGCC
ATGGCCGCGG CCACGGTGCT CATCGTGACC TTCTTTGTCA CCTCCTCGGA CTCCGGATCG
CTGGTGATTG ATACCCTGGC CTCGGGTGAT GTGCGCAACC CGACCGTGAC CCAGCGAGTC
TACTGGGCAA TCCTCGAGGG GATTGTGGCG TCGATCCTGC TGCTGGCGGG CGGTCTTGCC
GCCCTGCAGG CGGCGGCGAT CAGCGTCGGC CTGCCGTTCT CGGTGGTGAT GCTCGTGATG
GTGTTCGGGT TGTGGAAGAG TCTGCATTCC ACCGAGGCCG TGACGCCGAC CAAATATCAG
AAAGAGGCGC CACCGCCGCA TACCCTGCTG GGGTATACGG AGGATCTGGA CGACAAGATC
AAGTAG
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| Protein sequence | MEEPSSSPGL NQTRIAGFGI ICSPVFWISS AVIAAFVLFG AVFPDTAEEI FEKLQTGISE
YLGWYYMLVV TVFLIFSLYL MFSRYGGIRL GDQFEAPRFS YAAWFAMLFS AGMGIGLLFW
SIAEPMYHYL DPPHADGETS EAATEAMRYT FFHWGLHAWA IYIVVGLSLA YYAYRHNLPL
LIRSSLYPFI GDRIYGPWGH LIDILALFGT MFGVATSLGL GVMQINSGLN YVFGIEESTA
MQIILVAIIT LIAVGSVALG IDKGIKRLSN FNIGLAVILL ALLLIMGPTL FILRVLVEST
GVYVQHLPEM SLWADTIDET GWATVWTIFY WGWWISWAPY VGMFIARVSR GRTIREFVAG
VLLAPTAAAF VWLAVFGGTA MGYELGGVAN ISGAVEESVS TALFATIEAM PLWDWLAVLA
MAAATVLIVT FFVTSSDSGS LVIDTLASGD VRNPTVTQRV YWAILEGIVA SILLLAGGLA
ALQAAAISVG LPFSVVMLVM VFGLWKSLHS TEAVTPTKYQ KEAPPPHTLL GYTEDLDDKI
K
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