| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2746 |
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| Symbol | hsdM-2 |
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| ID | 2740713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2800783 |
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| End bp | 2802225 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637161643 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | NP_973344 |
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| Protein GI | 42528246 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.453882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA AAGAAGCAAC ACAAGCAAAA CCGGAACAGG CTCTTACGAA AAAAGTTTGG
AACATGGCAG ACGTTCTTGC GGCAGCCGGT ATCGGATTTA CTGATTATAT TATTCAGCTG
ACATATCTCT TATTTCTAAA AATGGATTTT GAAAAAGAAT CATACGGTTT AGGCAGTGCA
CTTCCTGACG GAAGTAAGTG GAAAGATATC GTTCAACTGG ATGGGCCAGA TCAGCTTGCA
AAATATGAAA AGATTCTGGA AGTTTTACAG GCAGCAGACG GACTTATCGG CGCAATTTTT
ACGGAAGCGC AAAATAAAAT TGCAAAACCG GCACTTCTTA AAAAACTGAT CGGAATGATT
GATGAAGAAA ACTGGTTCAG TATGGACGGA GACCTAAAAG GCGCAATTTA CGAAAGTATT
CTTGAAAAAA ACGGACAGGA TAAAAAGTCA GGAGCAGGGC AGTACTTTAC GCCGCGCCCC
TTGATTAATG CTATGGTTGA TGTTGTTCAG CCGAAAATTA CGGAGACCGT TGCCGACCCG
GCATGCGGAA CCGGAGGATT CTTGCTTTCT GCGTATGACT ATATGCGTAA ACAAAGCGAC
GAACAGAGTA AAGTGGAGTT CTTACAAACG AAGGCTCTTA GGGGAAATGA CATTACGCCT
CTTGTCGTAA CGTTGGCTTC TATGAATCTT TATCTTCACG ATATTGGAGT GGACACCACG
CCGATTAAAT GTGAAGATAG TTTGGAACAC GAACCCGAAC ATCTTGTAGA TGTAATTCTT
GCAAATCCGC CTTTCGGTGC TCGGCCTGCA GGAAGCGTCG ATATTTCGAC CATGCGTTCC
GATTTGATTG TAACGACAAG CAACAACCAG TTAAATTTTT TACAGCACAT GATGGTCATG
TTAAAGGATG GCGGAAGAGC CGGAATAGTT CTTCCCGATA ATGTGCTTTT TGCAGATGGT
GCCGGAGAAA TTCTCCGCAA AAAACTTCTA AAAGATTTTA ATCTTCATAC GATTCTTCGT
CTGCCGACCG GTATTTTCTA TGCAAACGGC GTAAAAGCAA ATGTACTGTT CTTTGAAAAA
GGAAGCCCGA CACAAGAGAC ATGGTATTAC GATTACCGGA CAGGGATTAA ACACACACTT
GCAACGAAAC CGCTTAAACG TTCCGACCTT GAAGACTTTG TAAGCTGCTA CTGTGCAGGA
CATGTTGAAG ACCGCAAAGA AACATGGTCG CCCGAAAATC CGAACGGCAG ATGGCGTAAA
TATCATGTCG ATGAACTGCT TGCACGGGAT AAAACCGGTC TGGATATTTC TTGGATAAAA
GACGGTTCCG ATACAGTGGA CTGTTCACTC GCCGAGCTTA TGCAAACCAT TCAAACCAAA
AGCGCAAACA TTGCCGCAGC GGTTACCGAA CTTTCCAAAC TGATTGAAGG AATTGAAGAA
TGA
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| Protein sequence | MAKKEATQAK PEQALTKKVW NMADVLAAAG IGFTDYIIQL TYLLFLKMDF EKESYGLGSA
LPDGSKWKDI VQLDGPDQLA KYEKILEVLQ AADGLIGAIF TEAQNKIAKP ALLKKLIGMI
DEENWFSMDG DLKGAIYESI LEKNGQDKKS GAGQYFTPRP LINAMVDVVQ PKITETVADP
ACGTGGFLLS AYDYMRKQSD EQSKVEFLQT KALRGNDITP LVVTLASMNL YLHDIGVDTT
PIKCEDSLEH EPEHLVDVIL ANPPFGARPA GSVDISTMRS DLIVTTSNNQ LNFLQHMMVM
LKDGGRAGIV LPDNVLFADG AGEILRKKLL KDFNLHTILR LPTGIFYANG VKANVLFFEK
GSPTQETWYY DYRTGIKHTL ATKPLKRSDL EDFVSCYCAG HVEDRKETWS PENPNGRWRK
YHVDELLARD KTGLDISWIK DGSDTVDCSL AELMQTIQTK SANIAAAVTE LSKLIEGIEE
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