Gene TDE2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2647 
Symbol 
ID2741092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2686092 
End bp2687087 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content38% 
IMG OID637161544 
Productlipoyltransferase and lipoate-protein ligase family protein 
Protein accessionNP_973245 
Protein GI42528147 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID[TIGR00545] lipoyltransferase and lipoate-protein ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.179015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT TAGAAACTTA TTCAAATGAT CCTGAATATA ATTTGGCTTT TGAGGAATAT 
TGTTTTAGGC ATCTGCCGCT TGAAAACGAT GAATACTTTT TTTTATGGCA GAATGGGCCT 
GCCGTAATTA TAGGTAAAAA TCAAAATGCT TATCAGGAAG TAAACGATGA CTATGTGAGA 
GGACATAATC TTAAGGTTGT CCGCCGCATA ACCGGAGGCG GGGCCGTATA TCATGACCTC 
GGCAATTTAA ATTTTTCTTT TGTTGCAAAA ACAAAGGAAA ATCAAACGAT TGATTTTAAA 
CGCTATTATA TTCCGATTAT AAATGCCTTG GAAAAAATCG GCGTTAAGGC GGAGCTTTCC 
GGCAGAAACG ATGTTACTAT CGACGGACAA AAATGTATCG GTGCTTCACA GTCTGTTTGG 
CAGGGCAGGG TTTTGAGTAA CGGCTGTATT CTTTTTGATG TCCGCTTGGA AGAACTTTCA 
AAAGCTCTTA ATGTGCGTAA AGAAAAGCTT GAATCAAAGG GCGTAAAAAG CGTTCGAGCC 
AGGGTTACAA ATATAAAGCC CCACTTAAAG CGGGATATTT CGGTTTTGGA TTTTAAGGCC 
GAATTATTAA AAGCTATCTT TGAGCTTGAA GGCCAAGAAC CTGTAGAATA CAAACTTTCC 
GCCTCGGAGC TTGAGGGTGT AAAAAAAATA TATGCCGAAA GGTTTTCCCT TAAAGAATGG 
AACTATGGAG CTTCTCCCAA GGCCGAATAC TCTCACTATG AAAGGTTCCC CATAGGAAGC 
ATTGAGGTGT TTTTTAACGT TAAAAATGCA AAGATTTCCG GCTTAAAAAT TCACGGAGAC 
TTTTTCGGTA CAGAGGATGT TGCCGAAATT GAAAAACTCT TGGAAGGCTG CGAATACGAA 
AAAAATGCCG TAAGCACAAA ACTTGCAGAA ATCGATTTAA AAGCCTATTT CGGTGCAATC 
GAAAAAGACG AATTTATTGA AATGTTTTTT AGATAA
 
Protein sequence
MKYLETYSND PEYNLAFEEY CFRHLPLEND EYFFLWQNGP AVIIGKNQNA YQEVNDDYVR 
GHNLKVVRRI TGGGAVYHDL GNLNFSFVAK TKENQTIDFK RYYIPIINAL EKIGVKAELS 
GRNDVTIDGQ KCIGASQSVW QGRVLSNGCI LFDVRLEELS KALNVRKEKL ESKGVKSVRA 
RVTNIKPHLK RDISVLDFKA ELLKAIFELE GQEPVEYKLS ASELEGVKKI YAERFSLKEW 
NYGASPKAEY SHYERFPIGS IEVFFNVKNA KISGLKIHGD FFGTEDVAEI EKLLEGCEYE 
KNAVSTKLAE IDLKAYFGAI EKDEFIEMFF R