Gene TDE2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2450 
Symbol 
ID2739635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2479045 
End bp2479947 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content39% 
IMG OID637161343 
Productankyrin repeat-containing protein 
Protein accessionNP_973049 
Protein GI42527951 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTCG CTATTTTCTA TGATGAAAAG AAAAAAGACG CAGCGATGGC TATTAAAAAT 
ATAATCATAT CCCACGAATG TGATGTAACT TTATACAATG AAGATGAGAT ATGGAAAGAT
GAAAATTTAC ACACGCCGCG CCATATTATG AAAAACATTA CTCATGTTCT CTTTATTTAC
AGTAAAAATC CTGCTGCCTA TTTGGGCTTT ATGTTTTTTT TGGGCTATGC CACAGGTTTA
AATCTTCCGG TTCTTGTACT TGAAGAAAGC GAAAAGCTCG AACTGCCGAA GAACTTTTTG
CGTTCTTTTG TTATGCTGAC AATTAAGTCC TTTGAGTCCT ATTTTGAGGT AGAAAAAAAA
CGCTTTACGG AAAATCAGCT TAAAGAGCTG GCCCGTGCAA AACTTTTAGA AAACGGCTAT
TCTCTTTTTA TTCCGAATTA TGTGCGTGCG GTTAAAAATA ATGAAAAAGA AATCGTAGAA
CTTTTTATAG ATGCAGGCTT TGACCCTTCA CAAAAAGATT CCCTCGGAAC ACCGGTTTTA
TCCCTTGCAG TAAGAAACAA ATGTTTGGAA ACACTTGAAC TCCTGCTTGA AAGAGGGGCG
ACAATAAACC TTTGTGCAGA AGACAGAAAC TACTCGGCCT TGATGGATGC GGCTCAGGTC
GGATACATTG AAGCGGTACA AGCCCTCCTC GAAAAAAAAG CCGATACCAA TATTCAAAGC
AAGGACGGAC AAACAGCCTT GATCCTTTCG GTAGGCCGCC GTGAAGCCGA TATTGTGGAA
ATGCTTGTAA AGCACGGGGC CGATTATAAT ATCAAGGACG GCTTAGGTAT GTCTGCCCTT
GGCTATGCAA AACTCTTCGG GGATAAAAAA ATTTTATCCT TGTTTGGTGA ACAAACAAAT
TAA
 
Protein sequence
MNVAIFYDEK KKDAAMAIKN IIISHECDVT LYNEDEIWKD ENLHTPRHIM KNITHVLFIY 
SKNPAAYLGF MFFLGYATGL NLPVLVLEES EKLELPKNFL RSFVMLTIKS FESYFEVEKK
RFTENQLKEL ARAKLLENGY SLFIPNYVRA VKNNEKEIVE LFIDAGFDPS QKDSLGTPVL
SLAVRNKCLE TLELLLERGA TINLCAEDRN YSALMDAAQV GYIEAVQALL EKKADTNIQS
KDGQTALILS VGRREADIVE MLVKHGADYN IKDGLGMSAL GYAKLFGDKK ILSLFGEQTN