Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2431 |
Symbol | |
ID | 2739856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2459260 |
End bp | 2461539 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637161324 |
Product | bacteriocin ABC transporter, ATP-binding/permease protein, putative |
Protein accession | NP_973030 |
Protein GI | 42527932 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter [TIGR01846] type I secretion system ABC transporter, HlyB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00637775 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATATTAA CTAATAATAC TCTTTTTTTA CTCTTTTTTC AAGCTGTAAT TTTTTTTTCT CACATATTTA AAAAATTACT ATTAATTACA AAAAAAAACT ATAAGAATTA TAGAGAGGTA TATATGAAAA ATATAATTTT ACAAAAAACC CGTGAAGATT GCGGAGCTGC ATGTATTGCA AATATATGCA GGCATTATGG GAAGCCGATC GATATAGATA AGATAAGAAG GCTGTTTCAA GGCGGTAAAA GGGGAGCTTC AGGTTTGGGC ATAATTCATG CTGCCGAGAC CTTAGGGTTT TCATGCCGAG GGGCTCTTTC TGAATCAAAA GAAATCCCAA AAAATATTCC TATGCCCTTT ATTGCTCATG CTGTAAGGGG GAGCGATAAC CATTATCTTG TCGTTTATAA ATCGGATTCA AACTATGTTT ATTTGGCGGA TCCCTCCGAA GGATATAAAA AAATAAACAC AGAGGTTTTT CAAAAAAATT GGACAGGCGC TTTTTTTATA CTTTTGCCCC AGCCGGATTT TTCCGAAAAA AGTGCTTCAT CAAAGGGCTT AACCAGATTT TTGCCTATTT TAAGGTCTCA CAAAAAAATA TGTGCGGAAA TTTTAATAGC GAGCATTATC CTGTCTTTTT TGGGCATTAT TAGTGCGTTT TATTTTAGGT TTTTGATTGA TGAGGTACTA AGCTCCAATT TAAGAGAGAC TCTTACCGGT TTTTCGGTAG GCTTTTTGGG CGTAATTATT TTTAGAAGCC TTTTGGGTTT GGCCAGAAAT CAGCTTTTGA TGAGTATGAG TTATAAGATT GATACGGTTT TGGTCTATCG ATATTTTGAG CATGTTCTTC ACTTACCGAT GCGTTTTTTT ACGGGAAAAA AGACCGGAGA GCTTGTTGCA AGGATGAACG ATACTGTTAC GATAAGGCAG GTTATTTCCG CTACGGCCCT GACCGTTGTT TTAGATTCAT TGATGCTTAT TTTCGGAGCA ATATTTTTAA TCTCCCTCGG TTCAAATCTG CTTGTTGCAG CCCTTGTGCC TGTGGTGGTA AGTTCGGTTT TGGTATGGCT GTATGCAAGG CCTTATCAAA AAATGATAAG GGCCAGGGCC TCCGCCGAGG CCGAAAAACA CTCCTGTATT GTTGAAAGTC TTAACGGAAT AGCTACGATT AAGGCCTTGG GTGCCGAATC TAAGGCCCTT GAAAGAGCCG AGTTTAAAAT CGTAAGTGCC ATCAGAAAGG GTATCAAACT TGCATCTTTT TCCAATTATC AAAACAGCCT CCAAAATTTT ATCGGAAGAT GCGGAACCTT GGCTATTTAT TGGCTCGGAA GTTTAAATAT CTTAAACGGT TCAATGTCTT TAGGCCAATT AATTTCCTTT GTCATCCTTT CAGGTTATTT TTTGGATCCT CTTGCAAGGC TTTTAACTCT TCAGCCACAG CTTCAAGAGG CCTATGTTGC AGCGGAAAGG CTTGCTGAAA TCTTTGATGA AGAAACCGAA GAAAATTTGG ATAAGGGAAA AATCGAATCG AATGGCCTTG CAGGCAAAAT CGATATAAAA AATTTATCCT TCGGCTACGA TTCCCATTCA AAAAATTTGA AGAACATAAA TTTAAGTATA AATCCCGGGG AAAGGGTCGC CTTTGTCGGT GCTTCAGGTT CCGGCAAGAC CACCCTTGCA AAGCTTTTGA TGAAATTTTA TTCTGCACAG GAAGGGGATA TTTTTGTAGA CGATATAAAC CTAAAAGACT TAAAAAACGA TTCTTACCGT AAGCAAATAG GCTATGTTCC TCAGGACATT CTCTTGTTTT CGGGAACGAT AGCGGAAAAC ATAAATTGGA GTTCAGGAAA CGGTGATTAC AGGCGGATGA TGGCAGCTGC CGAAGTTTCA GGCGCTGCTT CTTTTATCGA ATCCATGCCC GATAGGTACA ATACCCTTGT CGGGGAGCAA GGCACCACCC TTTCCGGAGG AGAAAGGCAG CGTATAGCTA TTGCACGTAT CCTTTTACAC AATCCATCCA TGCTGATTTT GGATGAGGCT ACTTCAGCTC TGGATGGAAT TTCGGAAGCG GAAGTTTTGA ATACTCTCAA AGAAATCGGT GCAGGCCGGA CTTCGATAAT CATAGCTCAC AGGTTAAGCT CAATCAAGGA CTGCGATAAA ATCTTCGTGT TCGATAAGGG CGAAATAGCC GAGGCGGGAA CACACGCAGA TTTGCTCGAA AAATACGGGG TTTATTCAAG ATTATGGGAA ACACAAAATA TGGAGGAGGT TGTAGCATGA
|
Protein sequence | MILTNNTLFL LFFQAVIFFS HIFKKLLLIT KKNYKNYREV YMKNIILQKT REDCGAACIA NICRHYGKPI DIDKIRRLFQ GGKRGASGLG IIHAAETLGF SCRGALSESK EIPKNIPMPF IAHAVRGSDN HYLVVYKSDS NYVYLADPSE GYKKINTEVF QKNWTGAFFI LLPQPDFSEK SASSKGLTRF LPILRSHKKI CAEILIASII LSFLGIISAF YFRFLIDEVL SSNLRETLTG FSVGFLGVII FRSLLGLARN QLLMSMSYKI DTVLVYRYFE HVLHLPMRFF TGKKTGELVA RMNDTVTIRQ VISATALTVV LDSLMLIFGA IFLISLGSNL LVAALVPVVV SSVLVWLYAR PYQKMIRARA SAEAEKHSCI VESLNGIATI KALGAESKAL ERAEFKIVSA IRKGIKLASF SNYQNSLQNF IGRCGTLAIY WLGSLNILNG SMSLGQLISF VILSGYFLDP LARLLTLQPQ LQEAYVAAER LAEIFDEETE ENLDKGKIES NGLAGKIDIK NLSFGYDSHS KNLKNINLSI NPGERVAFVG ASGSGKTTLA KLLMKFYSAQ EGDIFVDDIN LKDLKNDSYR KQIGYVPQDI LLFSGTIAEN INWSSGNGDY RRMMAAAEVS GAASFIESMP DRYNTLVGEQ GTTLSGGERQ RIAIARILLH NPSMLILDEA TSALDGISEA EVLNTLKEIG AGRTSIIIAH RLSSIKDCDK IFVFDKGEIA EAGTHADLLE KYGVYSRLWE TQNMEEVVA
|
| |