| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2406 |
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| Symbol | |
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| ID | 2740708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2432137 |
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| End bp | 2433603 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637161297 |
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| Product | TldD/PmbA family protein |
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| Protein accession | NP_973005 |
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| Protein GI | 42527907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.410379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTATA CATCTGAAAG CCTGCTTGAA GCTGCAAAAA ACGCCGTTCC TAAGGCGGAG
CTTGTAACTT TACGCATTCA CCGCACAAGA GATACTTTCT TTGCGGCTCA GGATGGAGCT
TTTGAATCTT CCGGTTATGG GCTTGATCAG GGTTTTATGG TTGAGGTCTT GTATAAGGGG
CATATTGCTT ATGGGGCAAG TCAAAATATG ACGCCTCAAG GAGCTGCCGA AGCTGCCTGT
CAAGCCTTTA ATGCCGCTAA AACCGCTTCA GCCTTTAAAA TTGCCGATTT TGACAAAAAT
GTCAGGCCGG ATACGGAATT AAAATACGAG ACTCTCAGGG GCAAAAAGAC CCGCCCTTCC
AAAACGGAAA TTTTCGATTA TCTTTTTGAG ATATGCAATA TTTTAAAAGT CTCCGATGAG
GTTATTGACA CTCATGCCTA TGTAAATTTA GGCGAAGAGG TGATAGAGCT TTTAAGTTCA
GGAGGTGCAA AAATCTTACA GGATTTTTAC ACAATAGGTT CAAGTTTCGG TGCCGCTGCC
CGCCGAGGGG ACATAATTCA AAGGCGAACT TATAACGGCG CAGGTGCCCG TACCTTTCAG
GGAGGCTATG AGTTTTTAAA CTTTGCCAAA TCCAAGGTAG AAGCCAAAAG GGTAGGGAAT
GAAGTAATAG AGCTCTTGGG AGCCGAGTCC TGTCCTTCCG ACAGGCGTAC CCTTGTTCTT
ATGCCCGACC AAATGCTTTT ACAAATTCAC GAAAGCGTCG GCCACCCCTT GGAAATTGAC
CGCATTTTAG GCGATGAAAG AAACTTTGCA GGCGGCAGTT TTATAAAGCC TGAAGATATA
GGAAGCTTCC AATACGGCTC AAAGCTTATG AATATCTGCT ACGATCCTAC AATTCCATAT
CAGCTTGCCA CCTTTGCTGC CGACCAGACG GGAGCTCAGG CAAAGAAAAC CTTTATAATC
AAGGATGGAA TTTTAGTCTG TGCCTTGGGA AGCCTCGAAA GTGCAGGCCG CCTCTATGCA
GGCAAAACCG TTCCGCCGGA CAAGATGGTC GCAAACCAAA GAGCAACCTC GTGGAACCGG
CCGCCGATAG ACAGAATGGC AAACCTAAAC CTTGAACCTG GAACCAGCAG CTTTGATCAA
ATAATTTCTT CAATCGAAAA GGGAATTATT ATGACATCTA ACCGCTCATG GTCGATAGAC
GATTACCGCA ATAAATTTCA ATTCGGATGC GAATACGGCC AATTAATCGA AAACGGAAAA
ATTACCAAAA CCGTACGCGA CCCGAACTAC CGCGGTGTAT CTCAAAACTT TTGGCGAAAC
CTTTGTGCTG TAGGCGATAA ATCCACATTC CATGTTTACG GAACGCCTAA CTGCGGTAAG
GGAGAACCGA ATCAGGTTAT CAGTGTAGGA CACGCAAGTC CTGTCTGCGC ATTTTCTGAT
GTAGAAGTTT TTGGAGGCGG AAAATGA
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| Protein sequence | MIYTSESLLE AAKNAVPKAE LVTLRIHRTR DTFFAAQDGA FESSGYGLDQ GFMVEVLYKG
HIAYGASQNM TPQGAAEAAC QAFNAAKTAS AFKIADFDKN VRPDTELKYE TLRGKKTRPS
KTEIFDYLFE ICNILKVSDE VIDTHAYVNL GEEVIELLSS GGAKILQDFY TIGSSFGAAA
RRGDIIQRRT YNGAGARTFQ GGYEFLNFAK SKVEAKRVGN EVIELLGAES CPSDRRTLVL
MPDQMLLQIH ESVGHPLEID RILGDERNFA GGSFIKPEDI GSFQYGSKLM NICYDPTIPY
QLATFAADQT GAQAKKTFII KDGILVCALG SLESAGRLYA GKTVPPDKMV ANQRATSWNR
PPIDRMANLN LEPGTSSFDQ IISSIEKGII MTSNRSWSID DYRNKFQFGC EYGQLIENGK
ITKTVRDPNY RGVSQNFWRN LCAVGDKSTF HVYGTPNCGK GEPNQVISVG HASPVCAFSD
VEVFGGGK
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