Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2296 |
Symbol | |
ID | 2740261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2334373 |
End bp | 2336427 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637161185 |
Product | hypothetical protein |
Protein accession | NP_972896 |
Protein GI | 42527798 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCG GTAGAAAATG TCGTATAATT GTTTTTATAA GCTTAGTCTT ATTTACTTTT CCTGTTTTTT CACAAGATAA GAATTTTACC GATAAGCCGT CCTCGTCGGA TAAGAGGGTT GCTTCCGAAG AATTTAGGCG GGGTGTTCAA GCCTATTATC GAGGAACCTT TAATGAGGCC ATCCTTTTAT TCGAAAAAGC TCTTTCTTAT CTGCCCGATG AGTCCTTAAT TTTAGATTGG CTTGGAAAGG CCTATTACAG CTCCGGTGTT GAAGGTGCAG CCCTGACTCA GTGGGAATTG GCCGAGGCAG CAGGTTACGG CGGAATGCTT TTAAAAAACA AGATAGAAAT TCTAAAAGAA TCGAGGAGCC TTACTCCCTA TTCTTCAGAT AACATAAAGT ATGTGGAAAA CTCTTCCTTT AGCTCAAAGA ACGGCACTGT AGAGCTTTTC CGCCAACCTC TTTCGATAGC AGCTGTTTCC GACGGCTCCT TTTGGATGAC GGCTTACGGA TCAAACGAGC TTTTGCACTT TAATGTAAAC GGTATTATCT TGGACAGAAC AAAGGGGCCT ATTCAAGGTT TTGACAGGCC TTTCGATGTT ATAGCCCTAT CGGACGGAAA TCTCTTGGTT TCGGAATTTG CTGCCGACAG GATTTCTCTC CTCGATAAAA ACGGTTCGTT TATAAAATCT TTCGGAACAA GAGGAAGGGG AAACGGAGAA TTTATAGGCC CTCAGTTTTT AGCTGAAGAC GAGTACGGCA ATATCTATGT TTGCGATTTT GGAAATGCAA GAATCGTTGT TTTTTCTTCT GCAGGAGAAC CTCTTTTTAC CTTTGGAAAA AAAAGCGGCC TTTTCGGGGG CTTTACGGCT CCTGCGGGGA TAGCTGTAGT TGACGGGCTT GTCTATATTG CCGATGCAAT AAAGGGCGCT GTTTATACCT TCGATACGGC CGGCAACTTT GTTCAATCCC TCCTGCCTGA AGGCACCTTA AAGCAAATAG AATCCCTTAG GGAATGGAAC GGCAATTTGG TTGCTTCTGC AGGGAATAAG GCTTACCTTA TCGATATTGC TTTTTCGACT GTAAGCGAGT TGACGAGTCT GGGAAATGTT CCTACAAAGA TTACGGCTGC GGTTCCCGAT GTGAACGGAA GTCTTCTTTT AATAGACCAT AAAAATCAAA CGGTAGAAAT AACTTCAAGA ATAAATGAAC TTGCAGGCGG CCTTTTTGTA TTGATAAAAA AAGTTTATTC AGATAAATTC CCTGAAGTCT TGGTTGAAGT AAGCGTACAA AACCGCGACG GCAAACAAAT TGTAGGTTTG ACTCAGGATA ACTTTATAAT CACGGAGGGA AACAGGCCTG TTGCCGATTA TTCTTTGACC GGTTCTTCCT ATCTTAATAA AACTTGCGAT ATAGCCGTCA TTGTTGAAAG ATCTCCCAAT TCCTTAAAGG AAAAAGCCTT AATAGAGGCT GCCTTAAAGG AAATTGCAGA AGCAATGCAG GGCAGGGGAA AGATAAGCCT TATTTCAGCC TCATCTATTC CCGCTCTTGA GGGAAAATTC TCTCCTGCCG ATTTGATAAC CCTGCCTAAC CGCATAAAGA CTCCGGCCTC GTCCGACTGG AAATTAGATC TTGCTTTGAG GCTTGCCGTC GGGGAGCTGA TAAATGCCGA ACAAAAAAGA GCCGTTCTTT TTTTGAATTT CAGCGATCCT AATTCGGATA ATTTTAAGCA GTATAATTTA AACGACCTTG CTTCATACAT GAAAAATAAT AATATACGTT TTTATCCGAT TAGTTTAAAA AAGGGAGCTC CTGCTTCCGA AATGAGCTAT CTTGCAAAAA AGACGGGCGG TAAGACCTCA TACATCTATG CCGAAAGGGG CTTAAAACCT CTTATTGACG ATATTATCGA AAAGCCTTTG GGAATGTACC AGCTGAAATA TACTTCTACC ATGTCCACCG ACTTCGGTAG GTCATTTTTA CCCGTAGAAG TAGAGGTTCA GCTTTTGGAA AGATCAGGCC GAGATGAAAT AGGATACTTT GCTCCATTGG AGTAG
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Protein sequence | MKFGRKCRII VFISLVLFTF PVFSQDKNFT DKPSSSDKRV ASEEFRRGVQ AYYRGTFNEA ILLFEKALSY LPDESLILDW LGKAYYSSGV EGAALTQWEL AEAAGYGGML LKNKIEILKE SRSLTPYSSD NIKYVENSSF SSKNGTVELF RQPLSIAAVS DGSFWMTAYG SNELLHFNVN GIILDRTKGP IQGFDRPFDV IALSDGNLLV SEFAADRISL LDKNGSFIKS FGTRGRGNGE FIGPQFLAED EYGNIYVCDF GNARIVVFSS AGEPLFTFGK KSGLFGGFTA PAGIAVVDGL VYIADAIKGA VYTFDTAGNF VQSLLPEGTL KQIESLREWN GNLVASAGNK AYLIDIAFST VSELTSLGNV PTKITAAVPD VNGSLLLIDH KNQTVEITSR INELAGGLFV LIKKVYSDKF PEVLVEVSVQ NRDGKQIVGL TQDNFIITEG NRPVADYSLT GSSYLNKTCD IAVIVERSPN SLKEKALIEA ALKEIAEAMQ GRGKISLISA SSIPALEGKF SPADLITLPN RIKTPASSDW KLDLALRLAV GELINAEQKR AVLFLNFSDP NSDNFKQYNL NDLASYMKNN NIRFYPISLK KGAPASEMSY LAKKTGGKTS YIYAERGLKP LIDDIIEKPL GMYQLKYTST MSTDFGRSFL PVEVEVQLLE RSGRDEIGYF APLE
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