| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2284 |
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| Symbol | |
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| ID | 2740034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2321015 |
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| End bp | 2321986 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637161173 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | NP_972884 |
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| Protein GI | 42527786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.489118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGATA CAAAGCAAAA AAATAAAAAT AAAAAGATTA TTTTAATGGT TGCTGCCGCA
ATAATTATAC TTTTGATAGT TTGGATTCTT TTTTTACCCA AGAAGGGAAC TGAGGAGATT
TCTCAAACGG TTACGGTAAC TAAAGAAGTA ATACAGGATG TTATTCAAGT TTCAGGCTAT
ATCCAGCCTG CTCAACAGCA AAACCTTCAC TCTCCCGGCG AGGGCCTTAT AAAAAAAGTT
GCGGTTAAAG AAGGCGATAC CGTAAAAAAA GGCGACCTTA TCTTTGCTCT TGACAATACC
TATCAGGCTT TTCAAGTTGC AAAGCAGGAA TTTCTTATCG AAAAAGAAAA ATTGCAAGGC
TATTCTAAAA ACCTTGAACT TATGAAACTG GAGCTTGAAT CTTTAAAGAG GGCCTTACGG
GATAGAAGCG TTTATGCAAA GTTTGACGGT ATAGTCGTTT CTTTTGATCT TACCGAAGGT
TCATATGTTA TGCCCAAGGA TAATTTCGGG GTGATTATAG ACCGCTCCTT TTTTAAGTCT
ACTGTCGATG TTTCAGAAGG AGATGTTCCT AGGTTAAAAG TAGGGCAAAA AGTTTTACTC
AGCTTTCAAG CTCTCGGCGA TGAAAAAGTG GAAGGCCGTG TTACCTATCA CTCTTCAATC
GCTAAGTCCG GCAGCCAAAG GGGTGCTACT GTGATAGAAA CAAAGATAGT TGTCGATAAG
CTCCCCGAAA ATGTTTTACC CGGTTATTCT TTTAGCGGAA ACATTATTGC CGGTGAAGAT
GAAGAAGTTT TGCTTTTGGA TCAAACGGCT CTTTCCTACG ATAAGGGCGA ACCATACGTT
GAAAGGCTTC TTGAAAACGG CAAGATTGAA AGGGTTAATG TCGAGGTTGA AGCCTATACT
CAGGGCACCG TAAAAGTTTT ATCCGGCTTA AAGGAAGGCG ATACCTTGAG AGTAAAGCCT
CCTAAGTGGT AA
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| Protein sequence | MQDTKQKNKN KKIILMVAAA IIILLIVWIL FLPKKGTEEI SQTVTVTKEV IQDVIQVSGY
IQPAQQQNLH SPGEGLIKKV AVKEGDTVKK GDLIFALDNT YQAFQVAKQE FLIEKEKLQG
YSKNLELMKL ELESLKRALR DRSVYAKFDG IVVSFDLTEG SYVMPKDNFG VIIDRSFFKS
TVDVSEGDVP RLKVGQKVLL SFQALGDEKV EGRVTYHSSI AKSGSQRGAT VIETKIVVDK
LPENVLPGYS FSGNIIAGED EEVLLLDQTA LSYDKGEPYV ERLLENGKIE RVNVEVEAYT
QGTVKVLSGL KEGDTLRVKP PKW
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