Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2271 |
Symbol | |
ID | 2740021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2308571 |
End bp | 2309155 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637161160 |
Product | HAM1 protein |
Protein accession | NP_972871 |
Protein GI | 42527773 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000183283 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT ATCTGGCATC CGGAAATGTA AACAAAAAAA GGGAAGTGCA GGAGCTTCTT CCGTCTCATA CGATCGTTTT GCCTAAAGAT GAGGGCATAG AATTTGATCC TGAAGAAACG GGAAGTACTT TTTTTGAAAA TGCTATGATA AAGGCAAAGG CTCTTTACCA TATTGTAAAA GCTCCTGTTC TTGCAGATGA TTCCGGTCTT TGTGTCGACT TTTTAAACGG AGCTCCCGGT ATTCATTCCG CACGATACGG TTCTATTGAA GGAGAGCATG TTTCGGCTGA AGCAGGTATT AACAAGGTCC TTTCAGAATT AAAGGGCGTA AAAGACCGAA GTGCCCGTTT TGCTTGCTGC ATGGTTTGCC TTTTGGACGA AAACCGTTTT TATTCGGTGC AGGAAACATG TGAAGGTCAT ATAACCGAAG CTCCGTCAGG TTCGGGCGGT TTCGGCTACG ATCCCATATT CTTTGTAGAA AAGTTCGGCA AAACCTTTGC CGAACTTACT TCTGAACAAA AAAATTCCAT TTCGCATAGG GGCAGAGCTC TTTTTTCAAT TTCAAGATTT ATAAAGGGGT CTTAA
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Protein sequence | MKIYLASGNV NKKREVQELL PSHTIVLPKD EGIEFDPEET GSTFFENAMI KAKALYHIVK APVLADDSGL CVDFLNGAPG IHSARYGSIE GEHVSAEAGI NKVLSELKGV KDRSARFACC MVCLLDENRF YSVQETCEGH ITEAPSGSGG FGYDPIFFVE KFGKTFAELT SEQKNSISHR GRALFSISRF IKGS
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