| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2196 |
|---|
| Symbol | |
|---|
| ID | 2740218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2231973 |
|---|
| End bp | 2232737 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637161086 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972797 |
|---|
| Protein GI | 42527699 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA AGTTTGAAGA TTTAACATTT ACAGACGATT TTATGTTCTG TAAAACTATG
CAAAATCCGA GGCTATGCAA AAAACTTATT GAAATGATAT TATCAGATAC AATAGGCAAA
ATTGCATATA TCTCGATACA GCATAATATT AACACTTACG AACAGGCAAA ATCCGTACGA
TTTGATGTTT TGGTACAGGC AGAAAACGGT AAATTATACG ATGTAGAAAT GCAGGTAAGC
AATGAGAGGA ATATTCCTAA ACGTATGCGG TTTTACCAAG CTGCCATAGA TATTTCTTTT
TTGGACAAAG GCAATTCCTA TAATAGCTTA AACGACAGTT TTATAATTTT TATCTGCACC
TTTGATGCCA TAGGCAAAAA TAGGTCTGTT TATACCTTTG AAAATCTTTG TATAGAGGAC
AAAAACACCT CTTTACAAGA CGGCATACGA AAGGTTATAA TAAATGCAGA GGCCTTTAAT
AACACTCAAG ACAAAGAATT AAAAGAATTT TTAGAATACC TTAAAACAGG GAAAGCGACA
AATGAATTTA CAAGGGAGAT AGAAACTATG ATACAAGCAG TAAAAAATAA TGAGCAGGCA
AGGCAAGAAT ACAGGTTAAT GTCTACTTTT GAAATGGACG CTAGGGAGAA AGGGGCTTAT
GACAAAAGCA TAGAAACAGC AAAACTTATG AAACTAAAAA ACTTTGATAT AGCTTTAATT
AAAGAAATAA CCGGTCTTCC TGAATCCGAA ATTGAAAAAC TCTAA
|
|---|
| Protein sequence | MVKKFEDLTF TDDFMFCKTM QNPRLCKKLI EMILSDTIGK IAYISIQHNI NTYEQAKSVR
FDVLVQAENG KLYDVEMQVS NERNIPKRMR FYQAAIDISF LDKGNSYNSL NDSFIIFICT
FDAIGKNRSV YTFENLCIED KNTSLQDGIR KVIINAEAFN NTQDKELKEF LEYLKTGKAT
NEFTREIETM IQAVKNNEQA RQEYRLMSTF EMDAREKGAY DKSIETAKLM KLKNFDIALI
KEITGLPESE IEKL
|
|---|
| |