Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2135 |
Symbol | |
ID | 2739394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2164726 |
End bp | 2165478 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637161025 |
Product | hypothetical protein |
Protein accession | NP_972736 |
Protein GI | 42527638 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA GATTTGAAGA TTTGACTTTA CAAGACGATT TTATGTTTTG TAAAGTTATG CAAAATCCGG ATTTATGCAA AAGACTAATC GAAATGATAC TATCCGATAC AATAGGTAAA ATTACATATA TTTCGATACA GCATAATATT AAAAACTATG AACAGGCAAA GTCAGTGAGA TTTGATGTTT TAGTACAGAC AGAGAACGGT AAATTTTATG ATATTGAAAT GCAGGTAAGT AATGAGAAGA ATACCCCCAA AAGAATGAGG TTTTACCAAG CAGCCATCGA TATTTCGTTC TTGGATAAGG GCAATTCCTA TAATAATTTA AACGACAGCT TTATAATTTT TATCTGCACT TTTGATGCTA TCGGTAAAAA TAGACCTATT TATATCTTTG AAAACATCTG CATTGAAGAT AAAAATATAT CTTTACAAGA CAGAACAAAA AAGGTTATAA TAAACTCAGA GGCTTTTGAA AATACCGAAG ACAAAGAATT AAAAGAGTTT TTAGAATACC TTAAAACAGG TAAAGCAAAA AGCGAATTTA CAAGGGAGAT AGAGGCTATG ATACAAACAA TAAAACAAAA CGAACAAGCA AGACAAGAAT ATAGATTAAT GTCAACTTTT GAGATGGATA TTAAGGATAG TGTTAAGCGG GAGACAGCAA AACTTATGAA ACAAAAAAAC TTTGATATAG CTTTAATTAA AGAAATAACG GGACTTCCAG AAACTGAAAT TGAGGAACTG TAA
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Protein sequence | MIKRFEDLTL QDDFMFCKVM QNPDLCKRLI EMILSDTIGK ITYISIQHNI KNYEQAKSVR FDVLVQTENG KFYDIEMQVS NEKNTPKRMR FYQAAIDISF LDKGNSYNNL NDSFIIFICT FDAIGKNRPI YIFENICIED KNISLQDRTK KVIINSEAFE NTEDKELKEF LEYLKTGKAK SEFTREIEAM IQTIKQNEQA RQEYRLMSTF EMDIKDSVKR ETAKLMKQKN FDIALIKEIT GLPETEIEEL
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