Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2080 |
Symbol | |
ID | 2741207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2109139 |
End bp | 2111574 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637160970 |
Product | cytidylate kinase/ribosomal protein S1 |
Protein accession | NP_972681 |
Protein GI | 42527583 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0283] Cytidylate kinase [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00017] cytidylate kinase [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATAG CGATTGATGG ACCTGCAGGC TCAGGCAAAA GTACTCTTGC AAAGATGCTT GCTGAACACT TGAACATTAC ATTTATGAAT ACGGGTAGTT TTTATAGGGC CTTGGCTCTG GCTGTACTGC GTTCTTTCGG AGGCGGAAAT GACGGAAGCG GCGGACAAAC TCCCGATCTT TCGGATGAAA AAAAATGGAC CTCATTTGCA GAAAAGACGG AACTTTTTTA TATAAACGGC TCCATGTTTT TAGGTAATGA AAATGTTGAG GCTTATCTTC GAAGCGATGC TGTAGAATCC ATTGTCGCAC CTCTTTCAGC TATAGTTCCT ATAAGGCACA TATTAAATAA GAAAATTCGT GAAGAAGCCG CTAAAACCGG AGCTGTTTGC GAAGGCAGGG ATATGACAAC CGTTGTTTTT CCTGATGCCG ATATTAAGTT TTATCTTGAT GCTTCTGTAG AGGCCAGGGC AAAAAGGCGC TTTGATCAGG GAACAAGCAA TCTTTCGCCG GAAGAAATAA AAAAAACGAT TCTCGAAAGA GATGAGGTGG ATAAAAACAA AAAAGAAGGG AGCTTAAAAG TGGCTCCTGA TGCCGTGTAT TTGGATACAT CGGACTTAAA TATAAATGAA GTTTATGAAA AAATGCTGGC AGAGGTGTCT GCAATAATAT CGGCATCAAA GTCGGAAAAT ATCAATAATA AAGGGTTATC TATGGAAAAG ATGGAAGTGG TAAAGGATGT TGAAAAAGAC TCCAACGGAA ACATCCAAGC ACAATTACAA GAGGAGTACT TAAATAATTT TGAGGCTCCT GAGGCGGGGA CAATTAAAGA AGGTTATGTT GTTGCTGTAA ACAACGGAAC CGTTTTTGTC GATGTAGGCG GTAAATCCGA GGGACATATT CCTTTGGATG AGTTTGATGA AGAACCTAAG GTAAACGATA AGGTAACTGT ACTTATCGAA AAAACCGAAA GCTCAAACGG TCATTTATCC GTATCAAAAC TCAAGGCCGA TAGGCTTATT CTTCAAAAAG AGTTTAAACA GGCTTATGCC GATAAGACTC CGATTGATGG TACTATCGCA AAGCAGGTTA GGGCCGGCTA TGAGGTAAAG CTTGGCGGCG GATTGACTGC TTTTTTACCT TTGAGTCAGG CAGATGTATC CAGAGTTGAA AAGCCTGAAA CCTTGGTAGG CGTAAAGTCT AAATTCTACA TTGAAAAATT AAGCTTTAAT TCACGCTCAG GTGAAAATAT TGTTGTAAAC AGACGTAAGT ACATGGAAGG GCGTACCGAA AAAGAAAGAG ACGCCTTTTT TCAAAATACA AAGATAGGCG ACACCGTAAA GGGAACGGTT AAGAGCTTTA CCAGTTTCGG CGCCTTTATC GATTTGGGCG GTTTTGACGG CCTCTTACAT ATCAATGATA TGAGCTGGGG TCATGTAACC CGTCCTAAGG ACTTCGTAAA GAAGGGTGAA GAAATAGAGC TTAAGGTAAT CCGTCTTGAT CCGGAAAACA AGAGAATAAA CCTCTCATTA AAGCATTTTA CTCAGGATCC TTGGCTTCAG TTTGAAGACA AGTTCCATGT TGAAGACATC GTTACCGGAA CGGTTACAAA GACAACGGAT TTCGGCGCCT TTATTGAATT GGATGAAGGA ATCGAAGGTT TGGCCCATAT CAGCGAATTC AGCTGGGTTA AGAAGATTAA TAAGCCTGAG GATATATTAA AGCCCGGAGA TAAGGTAACA TGTATGATTC TCGGCTACGA TATTCAGGCC GGAAGAGTTT CTTTGGGTCT AAAACAGGTT ACGGACAACC CGTGGGATAC GATTGAAGAG CGTTACCCTG TAGGAACCCG CTTAACCCGA AAGGTCGTTA AAATTACAAA TGCAGGCGCC TTTATTTCTC TTGAAGAAGG TATCGACGGA TTTTTACATG CAGACGATAT TTCGTGGATT AAACGCGTAA AACATCCGGG AAGCGAGCTT GAAGTAGGTA AAGAAATCGA AGTTATCGTT ATCGAGTGCG ATGCCGAATC AAGAAGAATC CGTTTGGGTA TTAAACAGCT TACCGATGAT CCTTGGGAAA AATTCGGAGC CGCTTATAAG GTCGGTTCTA TTGTTGAAGG CGAAGTTTCC TCAATCACCG ACTTCGGTGT ATTTGTAAAG GTTCCCGGAG ATATCGAAGG CTTAATCCAC AAACAAAATT TGGTTGAGTC CAGGGATGAA ACACCTGAAG AAGCTCTTGC AAAATATGCC GTAGGAGATA AGATCAAGGC TGTAGTAATC GAAATAAATC CGAGAAACAA AAAAACCGCT TTCTCAATTA AAGATTTTAA GCGAAAACAA CAGCAGGAAG AAATTTCTCA GTACATGTCA ACCGAACAAG AAGATGATGA TTCATCTTAT ACTCTTGGAG ACCTTTTAAA GAATAAACCG GAGTAA
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Protein sequence | MIIAIDGPAG SGKSTLAKML AEHLNITFMN TGSFYRALAL AVLRSFGGGN DGSGGQTPDL SDEKKWTSFA EKTELFYING SMFLGNENVE AYLRSDAVES IVAPLSAIVP IRHILNKKIR EEAAKTGAVC EGRDMTTVVF PDADIKFYLD ASVEARAKRR FDQGTSNLSP EEIKKTILER DEVDKNKKEG SLKVAPDAVY LDTSDLNINE VYEKMLAEVS AIISASKSEN INNKGLSMEK MEVVKDVEKD SNGNIQAQLQ EEYLNNFEAP EAGTIKEGYV VAVNNGTVFV DVGGKSEGHI PLDEFDEEPK VNDKVTVLIE KTESSNGHLS VSKLKADRLI LQKEFKQAYA DKTPIDGTIA KQVRAGYEVK LGGGLTAFLP LSQADVSRVE KPETLVGVKS KFYIEKLSFN SRSGENIVVN RRKYMEGRTE KERDAFFQNT KIGDTVKGTV KSFTSFGAFI DLGGFDGLLH INDMSWGHVT RPKDFVKKGE EIELKVIRLD PENKRINLSL KHFTQDPWLQ FEDKFHVEDI VTGTVTKTTD FGAFIELDEG IEGLAHISEF SWVKKINKPE DILKPGDKVT CMILGYDIQA GRVSLGLKQV TDNPWDTIEE RYPVGTRLTR KVVKITNAGA FISLEEGIDG FLHADDISWI KRVKHPGSEL EVGKEIEVIV IECDAESRRI RLGIKQLTDD PWEKFGAAYK VGSIVEGEVS SITDFGVFVK VPGDIEGLIH KQNLVESRDE TPEEALAKYA VGDKIKAVVI EINPRNKKTA FSIKDFKRKQ QQEEISQYMS TEQEDDDSSY TLGDLLKNKP E
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