Gene TDE2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2061 
Symbol 
ID2741188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2086869 
End bp2087882 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID637160952 
Producthypothetical protein 
Protein accessionNP_972663 
Protein GI42527565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00336712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGC TATTTTTTTC CGTATTGCTA TGCTGGACGG CTTTGGGCCT TTTTGCTCAC 
TTTCAAATTA TTTATACTCC GGCTTCAATA ATCGAAGCTT CAAATAACAA GGTTGATTTT 
ATAATTTCTT TTACTCATCC CTTTGATTCC GGCCTTACTA TGGACATCGG TAAAAATGAA 
GCAGGCGAAA TAAAAGGCTT AAAGGAATTC TATTCCGTCC ATAAAGAAAA CAAGACCGAC 
TTAATGCCCT TTTTAAAAAA GGGAGAATTT GAATCTGCGG AAAACAAGGC CTTTGCATAT 
ACCTTTGAAT TTGATAAAGA GGCCGGTTTT AAGGGAGGCG GAGACTGGGT CTTGGTTGCC 
GTTCCTCATC CTTATTTTGA AGCAGCCGAT GACGGATATA TTCAGCAGAT AACTAAGGTC 
TTTATCAACA AGGCCGGACT TTCGACCGAT TGGCAGTCAA GGGTTGCCGA AGGTTATCCC 
GAAATTTTGC CTTTGGTAAA GCCCTACGAT ATTTGGGAGG GCGGTGTGAT CCGTGCCCTT 
GTTTTGGACT CCGATGGAAA ACCCGTGCCT TATGCTCAGG TTGAATTTGA AAACATGAAC 
TACGATGTGG ATATGACAAA CAAGAAATTT ACCGGAGAAC CTAAGCTGCA AAAAGCGGGT 
GCCGGAATGA TAATGGCCGA TAATACCGGC GTTTTCGAGT TTATTCCTCC TTGTCCGGGA 
TACTGGGGCT TTGCCGCCCT TAGAGTAGGG AAGGAAAAGG AATTCGGAGG AAAAGAACTT 
TCTCAAGATG CCGTTATTTG GTTTGAGGTC AGCAAGATTG AAGATGCGGC CGAACAGGCT 
GATAGCACAA AACAAGCCGA TATATCTTCT TCTGACGGAG AGCCTTCTGA AAGAGCAAAA 
CCCAAGGAAG GATTTTCGCC TGCGGCCCTG ATAATAGTAA TCTTGCTTTT TGTGGTTATG 
TTCGCTTGGC CGCCTATCTT TAAAAAGATT TCGGATAAGG CTGAAAATAA GTAG
 
Protein sequence
MKKLFFSVLL CWTALGLFAH FQIIYTPASI IEASNNKVDF IISFTHPFDS GLTMDIGKNE 
AGEIKGLKEF YSVHKENKTD LMPFLKKGEF ESAENKAFAY TFEFDKEAGF KGGGDWVLVA 
VPHPYFEAAD DGYIQQITKV FINKAGLSTD WQSRVAEGYP EILPLVKPYD IWEGGVIRAL 
VLDSDGKPVP YAQVEFENMN YDVDMTNKKF TGEPKLQKAG AGMIMADNTG VFEFIPPCPG 
YWGFAALRVG KEKEFGGKEL SQDAVIWFEV SKIEDAAEQA DSTKQADISS SDGEPSERAK 
PKEGFSPAAL IIVILLFVVM FAWPPIFKKI SDKAENK