Gene TDE2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2034 
Symbol 
ID2740628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2061726 
End bp2062883 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content31% 
IMG OID637160925 
Productglycosyl transferase, group 1 family protein 
Protein accessionNP_972637 
Protein GI42527539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GAATTTTTAC CGATTGTTAT TATCCTCAAA TAAACGGAGT TGTAACCTCT 
ACGATGAACT TACAAAAAGA GCTGGAAAAG CTTAACCATG AAGTTTATAT AATCACAACC
ACATTTCCCA ATTTTAAGGA TGAGGATGAA AAACATATTA TCCGTATTCC TTCAATCCCT
TTCTTTAAAT GGTCCGAATT CAGAATAGGA TTATTTTTAA AACATACAAA GGCATACAAT
AAAGTAAAGG CTTTAAATTT CGATATAGTA CATACTCAAA CGGAATTTTC TATGGGCAAC
TTCGGTACTT TCATTGCAAA AGATCTAAAT ATTCCCTGCA TACACACATA TCATACTGTC
TATGAAGAAT ATACCCACTA TATTTCCAAT TTCGGCAAAA GCCCTTTAAA AAAAGTAGTA
AGAAAGCTCT CAAAACGTTA TATTGCCCAT TTTTCAGGAG TTATAGCACC CACAGAAAAA
ACAAGGGACC TTCTCATAAG TTATGGAGTA AAAAATAAAA TTTATGTAGT ACCTACAGGA
ATAAATCTTG AGAAATTTAA AAAAGATATT CCCGATGCCG AAACGAATAG CTTACTAAAA
TCTTTTAACA TAAAAAAAGA TTCATTTAAA CTTATATTTT TAGGAAGAAT ATCAAAAGAA
AAAAATATTG AAACTTTAAT TAATATAATG CCGAAAATAG TAAGCGAAAA TAACAATATC
CAACTTATCA TTGTAGGTGA CGGGCCTGAT AGGTTAGAGC TTGAAGAAAG GGTAAGATAC
TTAGATTTAC AAGATAATGT AATATTTACA AATAGAATCC CAAACGACAA GGTTCCTATA
TATTACAAAG CTGCCGATTT ATTTATAAGC CCATCAAAAA CTGAAACACA GGGCCTAACA
ATTCTAGAAG CAATGGCCGC AGGAGTTCCC GTTTTGGTAT ATGACGACAC AAATATCAAA
GGACTCGTCT TGCACAAAAA GACAGGCTTA TTATTTAAGG AAAACGATGA ACTTTTGGAC
AACATTAAAT TCGCATTAAA CAACAAAGAA GAAATTCAAA GTTATGCAAA AGAAGCATTT
AAGATAGCCG AGGACTTTTC GTCTGCCAAT TTTGCAAAAA AAGTAGAAAG AATTTATAAA
GAATTAATAA ATCAATAG
 
Protein sequence
MKIGIFTDCY YPQINGVVTS TMNLQKELEK LNHEVYIITT TFPNFKDEDE KHIIRIPSIP 
FFKWSEFRIG LFLKHTKAYN KVKALNFDIV HTQTEFSMGN FGTFIAKDLN IPCIHTYHTV
YEEYTHYISN FGKSPLKKVV RKLSKRYIAH FSGVIAPTEK TRDLLISYGV KNKIYVVPTG
INLEKFKKDI PDAETNSLLK SFNIKKDSFK LIFLGRISKE KNIETLINIM PKIVSENNNI
QLIIVGDGPD RLELEERVRY LDLQDNVIFT NRIPNDKVPI YYKAADLFIS PSKTETQGLT
ILEAMAAGVP VLVYDDTNIK GLVLHKKTGL LFKENDELLD NIKFALNNKE EIQSYAKEAF
KIAEDFSSAN FAKKVERIYK ELINQ