Gene TDE1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1991 
Symbol 
ID2740444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2008724 
End bp2009488 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content29% 
IMG OID637160881 
Producthypothetical protein 
Protein accessionNP_972594 
Protein GI42527496 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA GATTTGAAGA TTTGACATTT ACGGATGACT TTATGTTTTG TAAAGCTATG 
CAAAATCCTG ACTTATGTAA AGGACTGATT GAAATGATAC TAGCCGATAC AATAGGTAAA
ATTGCATATA TTTCGATACA GCATAATCTT AAAAACTATG AACAGGCAAA GTCGGTGAGA
TTTGATGTTT TAGTGCAGAC AGAAAACGGT AATTTATACG ATGTTGAAAT GCAGGTAAGC
AACGAGAAGA ATATACCTAA AAGAATGAGG TTTTACCAAG CAGCTATAGA CATTTCGTTC
TTGGATAAAG GGAATTTCTA TAACGATTTA AATGACAGCT TTATAATTTT TATCTGTTTA
TTTGATGTTA TCGGTAAAAA TAGACCTGTT TATACTTTTG AAAATATTTG TATAGAAGAT
AAAAATATAT CTTTACAAGA CGGAACAAAA AAGGTTATAA TAAATTCAGA GGCTTTTAAA
AATACCGAAG ATAAAGATTT AAAAGAATTT TTAGAATATC TTAAAACAGG TAAGCCAAAT
AATGAATTTA CAAGGAGGAT AGAAGAAGTG ATACAAACAA TAAAAGAAAA CGAACAAGCA
AGACAAGAAT ATAGATTAAT GTCTACTTTT GAGATGGACG CTAGGTATAA AGGTTTTTCA
GAAGGCTTAA AGCAAACGGC TAAAAATATG AAAATGGAAA AGCTGGATAT ATCTTTAATT
AAAAAAATAA CCGGTCTTTC CGAATCCGAA ATAGAAAAAC TGTAA
 
Protein sequence
MVKRFEDLTF TDDFMFCKAM QNPDLCKGLI EMILADTIGK IAYISIQHNL KNYEQAKSVR 
FDVLVQTENG NLYDVEMQVS NEKNIPKRMR FYQAAIDISF LDKGNFYNDL NDSFIIFICL
FDVIGKNRPV YTFENICIED KNISLQDGTK KVIINSEAFK NTEDKDLKEF LEYLKTGKPN
NEFTRRIEEV IQTIKENEQA RQEYRLMSTF EMDARYKGFS EGLKQTAKNM KMEKLDISLI
KKITGLSESE IEKL