Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1988 |
Symbol | |
ID | 2740441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2002879 |
End bp | 2005650 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637160878 |
Product | hypothetical protein |
Protein accession | NP_972591 |
Protein GI | 42527493 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.36521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGAATA TGCAATGCAA AATAAAATTC GTCTTTTTTA TTTCCTTTTT AACCTGTGCA TTTATACAGC TAAATGCTCA AAATCTTTTT GTTCAAAAAA CCAAGTATTT CGATATAATT TATTCTCCGG TATCGGAAAA GACGGCAGCC TTGATTTCGG AACATGCGGA CAATTATGCC GAAGAAATTT CTCAAAAACT AAACCGTAAA ATTCCAAAAA GAATGCCCAT CTATATTGAA GGCGGAAAGG AAGCCTTAAA CGGTTATTAT ACCTTTTTTC CGTACCGCCG GATTGTTCTT TTTGATACCT TGCCGGAAGA AGGTCAGCTA AGCAATTTAA GCGATATAAT CTTAAAAGTC CTCTATCATG AATTAACCCA TGCAATTTCA CTCACATATT TTTTGCCCCT CCTCCCAATG TCCTTTACCG AGGGTGTTGC CGTTTCGTAC GAAAGTGCGG AAGACGATCA GGGCAGACTA AACGATCCCC TGATAATGCA CCACCTAATG CAGGGGCGGC TTGAAAATGC AAGTCCTTCA TGGAAACAGG CGGCAGGAGC TAGAGATGTT TACCCCGGCG GACTTTGGCC TTATATTTAC GGCGGAGCCT TTGCCCAATA TCTTCAAAAA ATTTACGGAA TGGAAACCTA TGTAAAATAC TGGGCTAATC CTCTTTCCTC TTTTCCTCAG GGAAAAACAA AAAAGATTTT TGACAAGGAA CTTGATAAAC TTTGGAATAA TTTTTTAGAA TCGATTTACT TTCCCGAAAA GGCTCTCAGT CCTCAAAATC CGATTAAGGA AGCCGGAGGT TTTAGTCTTA TTGCAAGCTC TAAAGACGGC TTTGCCTGTT TTGATTTTAC AACAAAAAAC GTAATATTTT TTGACGATTC GGGAAAAGAA GAAAAACTTT TTACTGCAAA CCCTACCCTT TCTTTTTTAA GTTTTTCGCA AGACGGAAAA TTTCTTTTGG TAAGCGATTT GGTGAATACC CCTCACGGCG AACACAATAG GGCAACCATC TTTGACATGC AGAAAAAAAA GTTTTTAAGT AAAGAATTTC TGTCTTTAAG GTATGCGTCC TTTTGCGGGG AAGCGCTTTG CGGAATCGAA ATAAAAGGTC AGTTTTCCGA ACTTGTTTTA ATCGATCAAG AATCTTTTGA AAAAAAAGAA GGTCTTTCCA AGACCGGTCT TTTAAAGGCA GGGCCGGGAC TCCCCTATTC GGCTATTTAC AATCCCGTAT TTGCAGGCAA AAACAAAATA GCCCTCATTG CCGCCAACGG AATAAACCGC GATATTCTGA TACTCGATAC GGCTTCAAAA AAAATACAAA AACTTGAATT CGAAAATCAT CTTCCCGCAA TAAGATATTT ACAAAGCAAC AATTCGGAAG AAGAACCTGT TTTAAGTTTT TCGTGGGCGG GTAAAGATAA TCTTTACAGG TCGGCTTTTT TTAATTTAAA AACGAATGAG TTAAAGGTTT TGGAAAAAGA CATTTCCGGC GGTACTTTTT TCCCTGTTGT AAAGCAAAAA AAAGATACTA AAGAATATGA AATTATCTAT GCCGGAGTTT TTACAAAATA CAACTCGCTT TATAAAATAG ATTCTTCACT TTTTACTGAA AGGAAGGCAT CTTTAAAACC GCTCGATATT TCGGCTCAAG AAATAAAAAC AAAAATTCCT AATACAGATA TTTTAACAAA GGATAAGTAT AATTATTTTT CATGGATACA TAAACCCTTT CCCCTGCCCA TCATTGATTT TTCGGGACTT TTAGGAGAAA ACAAAACCGT ACCGATCGGT CTAAAATTAT ATTGGAATGA TCCTACAAAT CTTTTATATT TTGAAACTCT TTCTGTTTTT TATTTTAAGC CTTTTTTTTA TGAAACGTCC ATTTTACTCA AAGCAGCAAC AAGGCCTGCC GATATCCGGA TTAAATTTTA TGATGAAAAT AAATCCTTTA AATATAGAAA AATCGGAAGC AGCATAGAAA GCGAATTGCT CTTACCCTTA AATTCTTTTT ATCATAATGT TTCGGGAAAA GCCGGTTTAT CTATTGAAGG CTTCAGCTTT TTCGGCTCAT CCTACAAAAG AGCAAAAACT CTTTACGAAC AAAAATTAGG GAACCCCGTC CTATCCGAAG AATTATCCGC CGTTTATACT TATCAAAAAT CTTCTCAAAA GTTAAACACG AATTTTTTTA CAAAAGATTT TATAATGCTT CAAGCGGCAG CCGGATTAAA ACACGGCGTC CATTTTCCTT CAAAAACAAA TGCTCTTGCC GTTCAAGCTT ACGCAGCTTT TAGACCTCCG ATAATTCCGA TTAAATTAAA CTTAAGCTCA TATTTCGGGT ACAATGCCTT TGCTCTTCCG CACACCGGCA GCTACGGATT TTTTAACAGC ACGGCTTTGA TGGGTATGGC ATCTTATCTT CCCAATATGA GCGAATATGA AAACGTAAAA AAACTTATCC GTCCGGGAAA ATTAAATTAC GGCTTCGGCT TTGAGGGAGA GGTCAATCTT TTAAGTTATG ATATTCAAAC AGGAAGTTCA TGGCTTCCCA TATTTTTTAA CAGGCTCAAT ATTACAACAG GCTACAGAGC AATCTTTAAC TTTTTAGACG CAGGAAAAAA CACGGCCGAT ATTTATCAGT CGGTTTACGG CAAACTTTAT ATGACCATAA GCACAGCCGC AAATATCGGT ATGGAATACG CTCATCCTCT TGAAAAAGTA AAGATAGGAA AATTTAAAGC TATTATACAA ATAAAATTCT AG
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Protein sequence | MQNMQCKIKF VFFISFLTCA FIQLNAQNLF VQKTKYFDII YSPVSEKTAA LISEHADNYA EEISQKLNRK IPKRMPIYIE GGKEALNGYY TFFPYRRIVL FDTLPEEGQL SNLSDIILKV LYHELTHAIS LTYFLPLLPM SFTEGVAVSY ESAEDDQGRL NDPLIMHHLM QGRLENASPS WKQAAGARDV YPGGLWPYIY GGAFAQYLQK IYGMETYVKY WANPLSSFPQ GKTKKIFDKE LDKLWNNFLE SIYFPEKALS PQNPIKEAGG FSLIASSKDG FACFDFTTKN VIFFDDSGKE EKLFTANPTL SFLSFSQDGK FLLVSDLVNT PHGEHNRATI FDMQKKKFLS KEFLSLRYAS FCGEALCGIE IKGQFSELVL IDQESFEKKE GLSKTGLLKA GPGLPYSAIY NPVFAGKNKI ALIAANGINR DILILDTASK KIQKLEFENH LPAIRYLQSN NSEEEPVLSF SWAGKDNLYR SAFFNLKTNE LKVLEKDISG GTFFPVVKQK KDTKEYEIIY AGVFTKYNSL YKIDSSLFTE RKASLKPLDI SAQEIKTKIP NTDILTKDKY NYFSWIHKPF PLPIIDFSGL LGENKTVPIG LKLYWNDPTN LLYFETLSVF YFKPFFYETS ILLKAATRPA DIRIKFYDEN KSFKYRKIGS SIESELLLPL NSFYHNVSGK AGLSIEGFSF FGSSYKRAKT LYEQKLGNPV LSEELSAVYT YQKSSQKLNT NFFTKDFIML QAAAGLKHGV HFPSKTNALA VQAYAAFRPP IIPIKLNLSS YFGYNAFALP HTGSYGFFNS TALMGMASYL PNMSEYENVK KLIRPGKLNY GFGFEGEVNL LSYDIQTGSS WLPIFFNRLN ITTGYRAIFN FLDAGKNTAD IYQSVYGKLY MTISTAANIG MEYAHPLEKV KIGKFKAIIQ IKF
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