| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1941 |
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| Symbol | |
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| ID | 2740181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1956595 |
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| End bp | 1959375 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160829 |
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| Product | hypothetical protein |
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| Protein accession | NP_972544 |
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| Protein GI | 42527446 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00558858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA ATCCCGAGAC CGTATTAGAT CAAAAAAATG ATGAAGCCGT TGTTGTTGAA
AATAATGTTT TAGAAAATGA TAACGAAGCT TCCTTGGAAG AAAAGAAAAC ACCCGAAACA
AAAGAAGTAA AAATCAAAAA AAAGCACGGT GTTTTCTTTA AAATCGGAAT GACTTTTTTA
GTCATTGTAC TTGTATTGGT TTTACCTGTT GCGGGTTTTC TTATTTATTC TGCAATCGAT
GGTATAAATC CTATCGAGTA TATACCTGAA GGGCATTATG CCTATGTAAA CATAGATTCT
GCAGGGGAAT TTTTACAAAA GACTCTTTCA ATGCAGACCC TTGATTCGGT TTTAAGCTCG
CCTGAAACTG CTCAATTACA GGGAACTATC CGTTCTTTTA GAGCCTCTCC AATGCTGTCC
TCATGGTGGT TCGGTTCTGC CTCAAATATC AGCTTAGACA TTGCGGCCTA TCCCAACGGT
AGTTTCTTGA TTTTTGCTAA ACTGGGCTTT CGTTCGGCAG GAACAAGGCT TTTACCCCTT
ATTTTAAAAT TTAAGCCTGA CTTATTGGCT GATTTAAAAG AGCTTAAGCC TCTTGACGAA
AACGGTATAA GTTTTTGGCA GTATGATTTG GGCGGCGGTC AAGCTATATA TATCTTAAAT
TATAAGGATT CCGTAATTGC TTCTACATCC AAAGATTTAT TTTTTTCGGC CCTATCTAAA
AAGCATGAAG ATGAGCACAT TAAAACCTTG CGTAAATTTA TCAAAGAAAA GAAGGGCGGA
ACTTTAAGCA TATTAAGCGA TGTAAATTAT TTTACCAAAG ACACGCCAAA AGACGATTCT
ATAAGCAATA ATGTTGTGCG TGCCCTTAAA TTTCCGGAAA ATGCAAAGAT AGATCTTAGC
TTGGATTATA AAGATATACG TCTTTCAGGA CTTTGTAAGT GGGAAACCGA ATCCGAGGGC
TTAAATACTA TTCTTCAAAG ACAAGCCTTT ATTCCGGGAA TATTGAACAG GCTCCCTAAA
TCCGCCGACT ATATAAGTTT GATAAACATG GGGGACCCCC AATTTTTATT CCAAAATGGA
AAAGATATTT TAGGTTCATC TATATTGCAA TCATATAATT CGGCAAATAA GGCAGCCAAA
TTTGTTTTTA ATAAGGGTAT TGATGACTTG CTTTTTTCAT GGATGGGCGA AGAGATAGGT
GTTTTTGAAG TAAAACAATC CGATGTTCCT ATCTTTTTTG TTTCATTAAA AGACGAAAAA
CTATGCAGGC AAGCCCTCGA ATTAATCTAT TCCTCATTTT TTGTAAACAG AAATATCTCG
GCTCTTGTTG ACGGCATAAG AATACCGCGT ATAGAATTTC CCGATATTTT AACGGGGCTT
TTACGGGCCT TTAAGGTTGA GCTTCCCACT CCTTTTTATG TTATTGAAGG CGGGTATCTT
TATCTTTCGC AGAGTGCCGA AGCTCTAGCT TCTACATTAA ATGACGTAAA AAGAGGCGAC
TTGCTTGTAA AAACCGAAAA CTGGAAAAAC ATAACAAAAT CTTTTTCTCC CGAAACCTCC
GTCTTTGTTT ATTATAGTTT GGAAAATCAA GTTCCCTCAT TTTTAAGAAC AAATGAGGTT
TTACAATCCG TCTTAAAAGG TTTCGGACGG GGCCTGATCT CAATCCGGTT TGAAAAAGAA
AAAACCGTTA AATTTGAGGT TTATACTCAA AAAACCGAAG CTCATTCCTT GGGAGAGCTT
TCTGCCTTTC CATTCGAATT TAATTCAAGG TTGAGCTCGA ACCTTTATTG CGGAAAGGGA
ACAAACAATG TTCCATTTGC TTATTGGGTA AGCGGAACAA ACCTATATGC CCTAAATTTA
GCCGATAGAC AATTAAAATC GATTAAACTT GATGATAAGG CCTATTTAAA CCTCGATATT
AAAAAGGGGG TTGTGGATTC CGTTTGGGCA GTATCTGCTC GAGGAACCGT TTACAAAACG
GATTATAATC TGGAAGTGTC CTCAGGCTTT CCGATTCTAA CCGGAGAAAA GTTAAGCTCT
TCTCCGGCGA TTATACAGGA CAAGATAGTT GTTCCCGTTG CCAATAAGCC CGTTCTTTTA
TATGTCGACA GTGCAGCTTC CTTTTATTAC TCGGATGAGA TGAATACGCG TTTAAAGACT
GCTCCCGCAG TGTACGGCAA TTTTATTGCG GCTATTCCCC GTTCTTTTGA CAGCTACATG
TATGTTTTTG ACGATAAGGG AAAAATTATT TCGGGTTATC CGAAAGAGCT TGACGGTATT
TCGGCAGTTC AGCCTATTCT ATATAAAAAT AATACTTATG AAGCCGTTTT AACGGAGCAG
GGCTTGTTCT CTCTTAAGCC TTCACTTATA CAGGGAAAAG AGGAGTCGGT TTATTCCATA
GACCTTAACA GCTCTTGTAA AACTCAACCC GTTTATTCCG AAAAGCTAAA AATGTTCTTT
TTGATTACCG ATAACGGCTT TTTATATAAG ATAGATACCG AATGTAATAT AATAGACAAA
ATTCCTTTAA AGCAAAAAAA TGCATCCGAT TATCTTATTA CCCTCATCGA TCTTGATTCG
GACGGTTATG ATGATGTGCT TGTTTCGGGA GGAGGAAATT CCATATATGC TTATAGTGCG
AACCTTTCAC CCATAAACGG TTTTCCTGTT GCAGGAACGG GAATTCCTTA TCTAATCGAT
GTAGACGGAA ACGGAAGGCC TGAATTGATA ACCTGCGGTA TAGATAACCG CATTCATTCT
TATACGGGAG TTTCAAAATG A
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| Protein sequence | MSDNPETVLD QKNDEAVVVE NNVLENDNEA SLEEKKTPET KEVKIKKKHG VFFKIGMTFL
VIVLVLVLPV AGFLIYSAID GINPIEYIPE GHYAYVNIDS AGEFLQKTLS MQTLDSVLSS
PETAQLQGTI RSFRASPMLS SWWFGSASNI SLDIAAYPNG SFLIFAKLGF RSAGTRLLPL
ILKFKPDLLA DLKELKPLDE NGISFWQYDL GGGQAIYILN YKDSVIASTS KDLFFSALSK
KHEDEHIKTL RKFIKEKKGG TLSILSDVNY FTKDTPKDDS ISNNVVRALK FPENAKIDLS
LDYKDIRLSG LCKWETESEG LNTILQRQAF IPGILNRLPK SADYISLINM GDPQFLFQNG
KDILGSSILQ SYNSANKAAK FVFNKGIDDL LFSWMGEEIG VFEVKQSDVP IFFVSLKDEK
LCRQALELIY SSFFVNRNIS ALVDGIRIPR IEFPDILTGL LRAFKVELPT PFYVIEGGYL
YLSQSAEALA STLNDVKRGD LLVKTENWKN ITKSFSPETS VFVYYSLENQ VPSFLRTNEV
LQSVLKGFGR GLISIRFEKE KTVKFEVYTQ KTEAHSLGEL SAFPFEFNSR LSSNLYCGKG
TNNVPFAYWV SGTNLYALNL ADRQLKSIKL DDKAYLNLDI KKGVVDSVWA VSARGTVYKT
DYNLEVSSGF PILTGEKLSS SPAIIQDKIV VPVANKPVLL YVDSAASFYY SDEMNTRLKT
APAVYGNFIA AIPRSFDSYM YVFDDKGKII SGYPKELDGI SAVQPILYKN NTYEAVLTEQ
GLFSLKPSLI QGKEESVYSI DLNSSCKTQP VYSEKLKMFF LITDNGFLYK IDTECNIIDK
IPLKQKNASD YLITLIDLDS DGYDDVLVSG GGNSIYAYSA NLSPINGFPV AGTGIPYLID
VDGNGRPELI TCGIDNRIHS YTGVSK
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