Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1919 |
Symbol | |
ID | 2740417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1938409 |
End bp | 1939980 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637160805 |
Product | hypothetical protein |
Protein accession | NP_972522 |
Protein GI | 42527424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00679545 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTT TTGCTGTTTT ATCCGCCTAT GATATTTCGG AATATTCGTT TAAAAAACTC GAAAACGGTA TAATCCCATT TGAAGCCTCT TTCCGTGCGG CTGCCGCATT TCCCGATTGT AAAAAGGTTG TTATTTTAAC CTCTGCTTCA TGTGAAGCCC CTATCGTTTC CATATTAAAA AATATAAAAT CTGACGAGCT GAAAATAGAG TGGAAGGTTA AGGTTTTGGA AAAAATAAGT CCTCAAGCCG TATTTGAAGA AGCTGCAAAA GAAGCCGAAG CGGAATCTTC CGGCTTTGAA AATGTTTTCT TTTTGCATGG GGATGAGCCT TTTATCGATT TAAATGCAAC GGAAAAACTT TTTAAGCAGC ATTTGGAATA CAGAGCAGAA TACAGTTTTG CCGACGGATA CCCTGAGGGC CTTATCCCTG AAATTCTTAC CTCAGGTCTT TGTCCTATTC TTGCAAAGCT TTCAGAAAAC GAAACTTCTT TTGAGCGTTC TTTTATTTTC GATACGATAA AAAAAGAAAT AAACAGCTAT GATATCGAAA CTATGATAGC CCCCTTCGAT TTAAGGCATC TAAGGCTCCG CTTTGCAGCC GACTCAAAAC GGAATGCTCT TTTATGCAGC CGCTTTACAG GCATAAATGC TGAAAATTAT GCAGAATTGA TTGAAGAAAA AAAGGCAGAA CTTTTTACTC TTCCTGCATA TTACGGTATC GAGATAAATT CTTCCTATCC TTTAAAGTCG ATATATAAGC CTAATGAGGT TTTAGGACTT ACAGAAAAAA AAGAAATGGA TAAGGCTGCT CTTTTTTCTC TTATCGAAAA AATTGCGGAA TATTCGGATG ATGCCGTAAT TTCTCTTTCG GTTTTTGGTG AGCCTTCAAT GTATCAGGAT TGCCTTTCGG TAATCGAAAA AATTTTGTCG TTTCCGAAGT TATCCGTTTT GATTGAAACT TGCGGTTTAT ATTGGCCTTC ATCATTTATA GAACGAGTTG AAAAAGTTAT TGCGTCAGCT CCCGAAAGAA AAAACAAGAT GCTTCCGGTT TATTGGATTG TATGTATTGA TGCGGTCAGT TCAGGAATGT ATGCTAAGGT GCACGGTCTT TCCGAAGATG AGGCAAACAT TAAATTAAAA CAAGCTCTTA CTTTTACCGA CAGTTTAAAA AAAGTTTTTC CCGATGCCGT ATGGGCTCAA ATTATGCGCA TAAAAGAAAA CGAGATAGAG GTTGAGCCCT TTTACCGTTT TTGGAAAAAT TTGGGTGTTA ATGTAATTAT TCAAAAATAC GATACCTTTT GTAAATTGCT TGAAGATAAA AGAGTTGCAG ACTTATCGCC TTTTAATAGA CATCCATGCT GGCATTTAAA AAGGGATATG TATATTTTGG CTGACGGCTC GGTGCCTCTT TGCAAAGAAG ATGTTAAAAG AAATAATATT TTAGGAAATG CTTTTTCGGA CAGCTTAGAC TCAATCCGTA AAAAAGCATT CGAGGCATAT AAGAAGCATT TGGAATGCAA ATACGGAGAT TTGTGCGGAG CCTGCGATGA ATACTATACC TACAATTTTT AA
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Protein sequence | MKSFAVLSAY DISEYSFKKL ENGIIPFEAS FRAAAAFPDC KKVVILTSAS CEAPIVSILK NIKSDELKIE WKVKVLEKIS PQAVFEEAAK EAEAESSGFE NVFFLHGDEP FIDLNATEKL FKQHLEYRAE YSFADGYPEG LIPEILTSGL CPILAKLSEN ETSFERSFIF DTIKKEINSY DIETMIAPFD LRHLRLRFAA DSKRNALLCS RFTGINAENY AELIEEKKAE LFTLPAYYGI EINSSYPLKS IYKPNEVLGL TEKKEMDKAA LFSLIEKIAE YSDDAVISLS VFGEPSMYQD CLSVIEKILS FPKLSVLIET CGLYWPSSFI ERVEKVIASA PERKNKMLPV YWIVCIDAVS SGMYAKVHGL SEDEANIKLK QALTFTDSLK KVFPDAVWAQ IMRIKENEIE VEPFYRFWKN LGVNVIIQKY DTFCKLLEDK RVADLSPFNR HPCWHLKRDM YILADGSVPL CKEDVKRNNI LGNAFSDSLD SIRKKAFEAY KKHLECKYGD LCGACDEYYT YNF
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