| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1898 |
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| Symbol | secA |
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| ID | 2739127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1918212 |
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| End bp | 1920980 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637160784 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | NP_972501 |
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| Protein GI | 42527403 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATT CTATAATTAA AATTCTTTTC GGTTCAAAGC ATGAGCGGGA TATTAAGGCC
ATGCTCCCGA TTTTACACAA GATAAACGAA AAAGAGGCTT GGGCTCTTTC TCTCTCCGAG
GAGGAGTTTA AGGCAAAAAC GGATGAGTTT AGGGAACGCT ATCAAAAAGG GGAATCATTG
GATTCTTTTA TCCCCGAAGC CTTTGCCCTT GCACGGGAAG CTGCCAGGCG TATCTTGGGA
GAGCGTCCAT ACGATGTTCA GATTTTAGGC TCCCTTGTTC TTCATTCCGG TAAGATTGTT
GAAATGAAAA CGGGTGAGGG TAAGACCCTT ATGAGCGTTG CAGCCGCCTA CTTAAACAGC
CTTACAGGGA AGGGTGTCCA TATTGTAACT GTAAACGATT ACCTTGCAGA ACGTGATGCC
GATTGGATGA GACCCGTTTA TTCTTATCTG GGTGTAAGTG TCGGTGTTAT TCTTTCCAAT
ATGGAAAACG ATGCCCGCCG TATAGAATAT AACTGTGATA TAACCTACGG TACCAATAAC
GAGTTCGGCT TTGATTACCT CCGCGACAAT ATGCAGATGA GGCTCAAGGA CAAGACCCAA
AGAGAATTTT CTTTTGCAAT CGTAGACGAA ATCGACTCTA TCTTGATAGA CGAGGCTAGA
ACTCCCTTGA TTATTTCGGG AGCTGCCGAA GACGATACTC AGCGCTTTTT TGAAGTTGAC
CGCCTCATAG GTCAATTAAA AGAAGTCGAA AAAAATCCCG AAACGGGCGA ATATCCGAAT
GAGCTTGAGG GAGAAGAAGT TATCGGGGAT TATACGATAG ACGAAAAAAG TAAGAGGGTT
TCTTTTACCG ATTCAGGTAT GCTCCATATT CAGGATATCC TTCAAAGGCA GGGACTTATC
AAAAGCGGGA ACCTCTTTGA TGAAGAAAAC TTTGAATATA TTCACTATTT TACCCAATCG
GTAAGGGCTC ATGTTCTTTT CCATATTGAT GTGGACTATG TTATTCAGGA TGGTCAGGTA
CAGATAGTAG ACGAGTTCAC AGGCCGTGTT TTAGAGGGCC GCCGTTATTC GGACGGGCTC
CATCAAGCTA TTGAAGCTAA GGAGCATATT AAAATCGCTC AAAGGAACAG AACCCTTGCG
ACCATTACAT TCCAAAACTT TTTTAGAATG TACGATAAAC TTTCGGGCAT GACCGGTACT
GCAGATACGG AAGCCGTTGA GTTTACAAAG ATTTATAACT TGGATGTTGT CGTTATCCCG
ACAAACCTCC CTGTTGCCCG AAAAGACGAA CACGATGTAA TCTACCTAAA CGAAAACGAT
AAATTTGAAG CCCTTTGTAC CGAAATAAGC GAGGCTTATA AGAGGGGGCA GCCCGTCCTC
GTAGGTACGG TTTCTATCGA AAAATCTGAG CTTATTTCAA AACTCTTAAC AAAGAGAGGC
GTAAGACACG AGGTTTTAAA CGCCAAAAAT CACGAGAGGG AAGCTCTTAT AATTGCAGAA
GCCGGAGCAA AGGGTTCCGT TACCATAGCC ACCAATATGG CGGGACGAGG TACGGATATT
AAGCTGGGCG GAAGTCCCGA AATGAGGGCT AAAAAACGCA CTGGCACAAA TCCCAATCCG
GATTATTATG AAAAGGTTCT TGCCGAAGAA TATGCAAAAT GGCAAAGCGA TTATAATGAG
GTAAAAGAAC TCGGAGGCCT TTACGTAATA GGTACGGAGC GTCATGAAAG CCGCCGAATC
GATAATCAGC TTCGAGGCCG TTCGGGCCGT CAAGGAGATC CGGGACGCTC CAAGTTCTTC
CTTTCCCTCG ATGATGACCT GATGAGGCTT TTCGGAGGCG AAAACTTAAA AAATGTTATG
TCCAAGATAG GAATGAGGGC AGGGGAACCC ATCGAGCATC CTTGGATAAA TAAGAGCATC
GAAAAGGCTC AGACAAAGGT AGAAAACCGC AACTTCGATA TTCGAAAACA TTTGTTGGAA
TATGACGATG TACTGAACGA ACAGCGCTCT TTTATCTATG AGCAGCGAAA TGCAATCCTT
GAAGATGAAA ATCTTATCGA GCGTATTTAC GCAACCCTCG AAGAATTTAT AAGCGAAAAA
TTCGATGAGT ATAGTTCAAG CTCAAAGGCC GAAAAAGAAG AAAGAGCCCG TCTTATAAAA
GATATCTTTA GAGAAAAGTT TTCCTATACT CTGACCGAAG AAGATTTTGC AAATATCGAC
AAAAAAAATC ATGAAGAAGA GATAAACGAA TTTGTAGAGC ATTTTACAAA GGAGCTTAAA
GAAAAAGAAG CTCTTGCAGG TAAAGAAAAC CTGAACATGT TTATCCGCTA CCAATACTTG
CAGGCTATAG ACAAAAAATG GCTCGACCAT CTTGAAAATT TGGAATCCTT GCGTGAGGCA
GTTTATCTTC GCTCCTACGG ACAAAAAAAT CCTTTAACCG AATACAAACT TGAAGGATTC
GATATTTTTT ATTCCATGCT TGACGATATA AGAATCGAAA TAGCCTCCCG TCTTGTCCGT
GTTCAAATCA GTACGGAAGA AGAAGCCCAT GCTTCACGCC AAATGCGTTC CATTCAGGGA
AATGCCCAGC ACAATTCGAT GGGAAGTTTT TCAGGTTCAG GTCATGGAAT GGGACCCACA
GCCCTTTCTG CACGAAGCCG TCCTGAAAAT GCTCAGGTTG TGCGTACAGT TCCCAAGGTC
GGAAGGAACG ATCCATGTCC ATGCGGCAGC GGAAAAAAAT ACAAATACTG CTGCGGAAAA
AACGGTTAA
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| Protein sequence | MLDSIIKILF GSKHERDIKA MLPILHKINE KEAWALSLSE EEFKAKTDEF RERYQKGESL
DSFIPEAFAL AREAARRILG ERPYDVQILG SLVLHSGKIV EMKTGEGKTL MSVAAAYLNS
LTGKGVHIVT VNDYLAERDA DWMRPVYSYL GVSVGVILSN MENDARRIEY NCDITYGTNN
EFGFDYLRDN MQMRLKDKTQ REFSFAIVDE IDSILIDEAR TPLIISGAAE DDTQRFFEVD
RLIGQLKEVE KNPETGEYPN ELEGEEVIGD YTIDEKSKRV SFTDSGMLHI QDILQRQGLI
KSGNLFDEEN FEYIHYFTQS VRAHVLFHID VDYVIQDGQV QIVDEFTGRV LEGRRYSDGL
HQAIEAKEHI KIAQRNRTLA TITFQNFFRM YDKLSGMTGT ADTEAVEFTK IYNLDVVVIP
TNLPVARKDE HDVIYLNEND KFEALCTEIS EAYKRGQPVL VGTVSIEKSE LISKLLTKRG
VRHEVLNAKN HEREALIIAE AGAKGSVTIA TNMAGRGTDI KLGGSPEMRA KKRTGTNPNP
DYYEKVLAEE YAKWQSDYNE VKELGGLYVI GTERHESRRI DNQLRGRSGR QGDPGRSKFF
LSLDDDLMRL FGGENLKNVM SKIGMRAGEP IEHPWINKSI EKAQTKVENR NFDIRKHLLE
YDDVLNEQRS FIYEQRNAIL EDENLIERIY ATLEEFISEK FDEYSSSSKA EKEERARLIK
DIFREKFSYT LTEEDFANID KKNHEEEINE FVEHFTKELK EKEALAGKEN LNMFIRYQYL
QAIDKKWLDH LENLESLREA VYLRSYGQKN PLTEYKLEGF DIFYSMLDDI RIEIASRLVR
VQISTEEEAH ASRQMRSIQG NAQHNSMGSF SGSGHGMGPT ALSARSRPEN AQVVRTVPKV
GRNDPCPCGS GKKYKYCCGK NG
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