Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1886 |
Symbol | |
ID | 2739115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1907172 |
End bp | 1908578 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160772 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | NP_972489 |
Protein GI | 42527391 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000824769 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATT TTTTTTCGGT TAGAATAGAA ACGCTCGGTT GCCGCTTAAA TCAGGTAGAA TCCGAGGCTC TTGCCGTCCG TTTTGCCGAA TGCGGTTTTG ACGTGTTTTC AAAAGAAGCA GAGACTTCAA TTTTGCCTGT AAAACTGTGT ATTGTAAATA CCTGTACGGT TACGGGAAAG GCGGAACAAA AAGCCCGCCG TCTTATCCGG CTTTTACTAA AGGAGCATGA AGAGTCTGTC ATCCTTGTTA CAGGCTGCTA TGCAGAACTT GAAGCCGATT CTATCGAAAA AATAAATAAA AGAATTATAG CCTTTTCGGG CAAAAAAAAA GATGAGCTTG ATGGACTTCC TCAGTTTTTA AAAGATTCCT GCCTTAAAAA TAAAGATTTA AAAGAAGATA CCGTTAATCT TAAAAAAAAT CTTCTTATTT TTCGAAATGA AATATATGCA AAAGAAGATC AACAGGATAA ATCTTTTTTG CTAAAGGAAA CGGAAAGAAG AAAGTCAATG TTTAAGCTGA GCTCTCCCGT TTTTGTTTTT CATTCCAGAG CCAGTTTAAA AATACAAGAC GGATGTAATA ATGCTTGCGC CTATTGCAGA ATAAGGCTTG CACGCGGTAC TTCCGTTTCC CTGCCTGCTG AAGAAGCCGT AAGGCGGATA GTTCAAATAG AAAAAAACGG AGCCGCAGAG GTTGTTTTGT CGGGTGTAAA TTTATCCCAA TATAGGGACG AAACCTATGG AGGCTTTGCG AATCTTTTGG CCAAGCTTTT GGAAAATACA AAAAAAATAA GGCTCCGTAT TTCGAGCATG TATCCCGAAT GTGTAGATGA CGGCATTTTA GAAATTGTAG CAAATAAAAG GATTTGCCCT CATTTTCATC TTTCGATACA GTCGGGAAGC GATAAAATTT TAAAGGCTAT GAATAGGCCC TATAGGGAGG CCGACATCAG AATGGCGATA AATAATTTGC GCAAGGCAAA GGATAATCCT TTTATCGGAT GCGATATTAT TACCGGTTTT CCTTCCGAGA CGGAAGAGGA TTTTTTACAA ACATTTAAGA TGTGTGAAGA TTTAAAGATT CCCGGTATCC ATGTTTTTCC TTTTTCGGCC CGCCCGGGAA CAAAGGCTTT TTCGATGAGA CCTAAGGTTC CTGAAAGAGA AGCAGGTAGA AGGGCTTCGC TTCTTTCGGA ATTGAGCGGA AAAAACTATC AAAGTTATTT GGCCTCTTGT AACGGAAAGT TGTTTTTTGG TGTTATCGAA AAACCTCAAA ACAATGAGGA TTTGAGGATT GTAACCGAAA ATTATCTAAG TCTTCCTTTA GTAGTGAACA AGAAAGCCGA AAACTATAAG GGCGGAGAGG GTCTTTTTGT TGTCATAAAG GATGGAAATG CATATCTTGC GGATTAA
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Protein sequence | MSNFFSVRIE TLGCRLNQVE SEALAVRFAE CGFDVFSKEA ETSILPVKLC IVNTCTVTGK AEQKARRLIR LLLKEHEESV ILVTGCYAEL EADSIEKINK RIIAFSGKKK DELDGLPQFL KDSCLKNKDL KEDTVNLKKN LLIFRNEIYA KEDQQDKSFL LKETERRKSM FKLSSPVFVF HSRASLKIQD GCNNACAYCR IRLARGTSVS LPAEEAVRRI VQIEKNGAAE VVLSGVNLSQ YRDETYGGFA NLLAKLLENT KKIRLRISSM YPECVDDGIL EIVANKRICP HFHLSIQSGS DKILKAMNRP YREADIRMAI NNLRKAKDNP FIGCDIITGF PSETEEDFLQ TFKMCEDLKI PGIHVFPFSA RPGTKAFSMR PKVPEREAGR RASLLSELSG KNYQSYLASC NGKLFFGVIE KPQNNEDLRI VTENYLSLPL VVNKKAENYK GGEGLFVVIK DGNAYLAD
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