Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1748 |
Symbol | obgE |
ID | 2740593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1802022 |
End bp | 1803170 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637160634 |
Product | GTPase ObgE |
Protein accession | NP_972352 |
Protein GI | 42527254 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0657373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAAAT TTGCAGATGA ATCTAAAATA AGAGTTTCCT CAGGAAAGGG CGGCAACGGA TGCATTGCCT TTAGGCGGGA AAAGTATGTT CCCATGGGAG GCCCCTCAGG AGGGGACGGC GGCCGAGGCG GAGACCTTAT CTTTGAAATA CGTCGCAACA TGAGAACTCT GGTTCATTTG AGACATAAAA GAGTGTACAA GGCAAAAAAC GGCGGGGGAG GGGAAGGCTC TCAACGTTTC GGTAAAAAAG GCGATGACTG CATAATACCT CTTCCTCCCG GCTGTGTTAT AAAAGACCCG GAAACGGGAA AAACTATTTT GGATTTTGGA GATGCTGAAG AAGGCCGCTT TGTTTTTCTC AAAGGTGGAA ACGGCGGTTG GGGAAATTGT CATTTTAAGA CCTCCACAAA TCAGGCTCCT AAAACCGCCC TTCCCGGACA AGAAGGGGAG ACAAGAGAAA TAATCGTCGA GCTTAACATA ATAGCCGATA TAGGTTTGGT TGGTTTTCCC AACGCAGGAA AATCTTCACT TCTCGACTAT TTTACAAATG CAAGGCCTAA AATCGCTCCA TATCCCTTTA CCACCAAAAT TCCGAACCTC GGAGTTTTGC GTGTAGACGA AGAAAGAGAT GTCATCATTG CCGACATACC GGGAATCCTT GAGGGGGCTT CCGAGGGTAT AGGACTAGGC ATCAGATTTT TAAAGCACAT AGCCCGTTCT GCAGGTCTCG CCTTTTTAAT AGACCTTTCA GACGATAACT ATTTAAGGGC ATACGATATT CTTTGTAAAG AATTGGAAAG CTATTCAAAA GAATTGGCTC AAAAGAAAAG AATTATAATT GCCACAAAAT TGGATTTACC CGATACAAAA GAAAGATTTA CTGAGCTTAA AAATGCAATC CCCGATCAGG AAATTTTAGG TATTTCGCTT TACAATGAAT GGGGCTTGGA AGAGGTAAAA AAAGCCTTTA TCCGCTTGGC CGATGAAATG CAAAAAACAA AACCTCAAAA AGAAAGTCTT GACCCATACG GCCAAAATAA AAATTTTATG ACGGCAGAGC TCGATGATGT TTCTTACGAA GAAAAAAACG ATGATGAACA CTTTGGAGCA ACGGTCAGCC TAAGCCGTAA AAGGAAACCT AAAAAATGA
|
Protein sequence | MVKFADESKI RVSSGKGGNG CIAFRREKYV PMGGPSGGDG GRGGDLIFEI RRNMRTLVHL RHKRVYKAKN GGGGEGSQRF GKKGDDCIIP LPPGCVIKDP ETGKTILDFG DAEEGRFVFL KGGNGGWGNC HFKTSTNQAP KTALPGQEGE TREIIVELNI IADIGLVGFP NAGKSSLLDY FTNARPKIAP YPFTTKIPNL GVLRVDEERD VIIADIPGIL EGASEGIGLG IRFLKHIARS AGLAFLIDLS DDNYLRAYDI LCKELESYSK ELAQKKRIII ATKLDLPDTK ERFTELKNAI PDQEILGISL YNEWGLEEVK KAFIRLADEM QKTKPQKESL DPYGQNKNFM TAELDDVSYE EKNDDEHFGA TVSLSRKRKP KK
|
| |