| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1686 |
|---|
| Symbol | aroA |
|---|
| ID | 2740141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1740504 |
|---|
| End bp | 1741853 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637160569 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | NP_972290 |
|---|
| Protein GI | 42527192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA AGATTAAAAA ATCAAAACCC GTATCTCCCA TGCCCATTGA AGTACCTCCT
TCAAAGAGTC ATTCAATGAG GGCTCTTGTT TTGGCTACAT TTGCTGAAGG TCCTTCCCAA
ATAAAAAATC TTCTGATGAG CGGAGACACT AAAACGGCTG TATCGGTATT TGAATCCTTA
GGCGTAAAAT TTAAAATAGA ACAAAAAAAC ATATCCTCTG CCGATATAAT TGTTTTTCCG
CCGAAAGAAG GCTTAAAAAA AAGAATCGAA AAACAAAAGC AGATAAAAAT AGATGCGGGA
AATTCCGGCA CTCTTTTTTA CTTTTTAGGT TCCATTCTTT CTTTAATGTC TTCCGATTTT
ATTTTAACCG GAGATTCATC TATTTTAAAG CGTCCCGCGA AGCCTTTAAT CGAAATTTAT
GAGGAGCTCG GTTTAAAATA CGAATTTCTT GACGGTTTTG AAAAGGCTCC CATACGGGTT
TTACCCGGCT CATCTTCAAT TAAAAACCTT AAAGGAAAAA CGCTCTGTCT TGAGGGGGAT
TTTTCACAGG TTGTAAGCGG CCTCCTGCTT GGAGCCGGCT TACTCGATTT TCCTTTACAA
ATAAATTTAA AAAGAGCAGG GGAGCTTCCC TACTTAAAAA TGACCCTTCA TTGGCTTAAA
ACTTGCGGTA TTAAATTTGA TGTTTCGGAC GATTTTAAAA CTTTTAAAAT TATAGAAAGT
CAAAAAATTT TAGGTTTTTC GGCAGGCATT CCGGCCGACT GGTCTAGTGC TGCCTTTCCC
ATTGCCTTAG CCCTGATTAC GGCTTCAACT ATCAGCATAA AGAATATAGA TATAAATGAT
GTTCAAGGAG ATGCGAGGAT AGTAAAGGTC TTAAAAGAGA TGAATGCGGA TATCCGCTTT
GAGGAGAAAT CGCAAACCCT TAAAATTTTT CCTTCAAGTT TAAAGGGCGG AACCTTTGAC
TGTTCCGATA TTCCCGATGC AGTTCCGGCT CTTTCGGCGA TAGCCTGTTT TGCAAAAGGC
GAAACCATTT TAAAAAATAT AGAAATCTGC CGTTATAAAG AGTGTGACAG ACTTTCCGTA
ATTTCCTCAG AATTAAAAAA ACTTGGAGCC GATATTACGG AGGGAAGGGA TGTTTTACAT
ATAATAGGAA ACGCAGGTAA AAACCTAAGC CCCGCCTCGG TTGATTCTCA TAAAGATCAC
CGCATAGCTA TGATGCTTAC CATTATAGGC TTTGGTATTG ATGATAAAGA TGGGACTGTA
TTTACCCTAA AAAACGCAGA GTGTTTTGAT ATAAGTTATC CATCCTTTTT GGAAGATCTA
AAAAGGATGG GATTTAACAT TAGTCAATAA
|
|---|
| Protein sequence | MILKIKKSKP VSPMPIEVPP SKSHSMRALV LATFAEGPSQ IKNLLMSGDT KTAVSVFESL
GVKFKIEQKN ISSADIIVFP PKEGLKKRIE KQKQIKIDAG NSGTLFYFLG SILSLMSSDF
ILTGDSSILK RPAKPLIEIY EELGLKYEFL DGFEKAPIRV LPGSSSIKNL KGKTLCLEGD
FSQVVSGLLL GAGLLDFPLQ INLKRAGELP YLKMTLHWLK TCGIKFDVSD DFKTFKIIES
QKILGFSAGI PADWSSAAFP IALALITAST ISIKNIDIND VQGDARIVKV LKEMNADIRF
EEKSQTLKIF PSSLKGGTFD CSDIPDAVPA LSAIACFAKG ETILKNIEIC RYKECDRLSV
ISSELKKLGA DITEGRDVLH IIGNAGKNLS PASVDSHKDH RIAMMLTIIG FGIDDKDGTV
FTLKNAECFD ISYPSFLEDL KRMGFNISQ
|
|---|
| |